RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 FAIM2Q9BWQ8 316 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 SHARPINQ9H0F6 387 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 ESRP2Q9H6T0 727 aaKnown RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 PTGES2Q9H7Z7 377 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 FANCFQ9NPI8 374 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 FAM120CQ9NX05 1096 aaKnown RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 XPR1Q9UBH6 696 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 LPAR3Q9UBY5 353 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 FBXL7Q9UJT9 491 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 MCTS1Q9ULC4 181 aaKnown RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 PYCARDQ9ULZ3 195 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 ABCG2Q9UNQ0 655 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 B3GALT5Q9Y2C3 310 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 SNX24Q9Y343 169 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 PCNX3Q9H6A9 2034 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 MGAM2Q2M2H8 2515 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 IGLV3-32A0A0A0MS00 114 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 A0A0J9YW62 118 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 DPRXA6NFQ7 191 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 SHISA9B4DS77 424 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 UBE2CO00762 179 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 UBFD1O14562 309 aaKnown RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 TNFSF11O14788 317 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 ADAMDEC1O15204 470 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 ERLIN1O75477 346 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 ACTL6BO94805 426 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 PGM3O95394 542 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 SYNGR4O95473 234 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 ESRRBO95718 433 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 PDYNP01213 254 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 C2P06681 752 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 TUBBP07437 444 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 IL3P08700 152 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 IGHV4-31P0DP07 118 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 ZNF17P17021 662 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 SRD5A1P18405 259 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 IL32P24001 234 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 IGFBP5P24593 272 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 THBS2P35442 1172 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 RFX3P48380 749 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 CDH11P55287 796 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 TRA2BP62995 288 aaKnown RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 MRPS25P82663 173 aaKnown RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 RUNX1T1Q06455 604 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 EPS8Q12929 822 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 CDK5R2Q13319 367 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 NRF1Q16656 503 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 DECR1Q16698 335 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 GGTA1PQ4G0N0 100 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 CYP27C1Q4G0S4 372 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 KHDC1LQ5JSQ8 128 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 SFRP5Q5T4F7 317 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 ATPAF1Q5TC12 328 aaPredicted RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 ATG16L1Q676U5 607 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 CLEC2AQ6UVW9 174 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 APOOLQ6UXV4 268 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 C3orf62Q6ZUJ4 267 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 IL17RELQ6ZVW7 336 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 USP51Q70EK9 711 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 CYS1Q717R9 158 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 RPS27LQ71UM5 84 aaKnown RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 NUFIP2Q7Z417 695 aaKnown RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 SZRD1Q7Z422 152 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 IQCF2Q8IXL9 164 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 GTPBP8Q8N3Z3 284 aaPredicted RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 C1orf52Q8N6N3 182 aaKnown RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 ZNF525Q8N782 197 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 CEP112Q8N8E3 955 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 PTGR2Q8N8N7 351 aaPredicted RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 BANPQ8N9N5 519 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 DRAXINQ8NBI3 349 aaPredicted RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 OR6Y1Q8NGX8 325 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 OR2V1Q8NHB1 315 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 MOSPD2Q8NHP6 518 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 PIWIL2Q8TC59 973 aaKnown RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 ABHD3Q8WU67 409 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 ROBO4Q8WZ75 1007 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 HSD17B8Q92506 261 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 EXOSC8Q96B26 276 aaKnown RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 PHF21BQ96EK2 531 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 CLPTM1LQ96KA5 538 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 HBEGFQ99075 208 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 CACNG6Q9BXT2 260 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 HDHD5Q9BXW7 423 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 POTEKPQ9BYX7 375 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 ELOVL6Q9H5J4 265 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 TMEM185BQ9H7F4 350 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 MANSC1Q9H8J5 431 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 NGBQ9NPG2 151 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 SDHAF3Q9NRP4 125 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 GLRX2Q9NS18 164 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 FAIMQ9NVQ4 179 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 FBXO34Q9NWN3 711 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 PAQR5Q9NXK6 330 aaPredicted RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 TAS2R9Q9NYW1 312 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 CISD1Q9NZ45 108 aaKnown RBP5.18□□□□□ -1.58
VPS33B-207ENST00000557470 SENP1Q9P0U3 644 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 PCTPQ9UKL6 214 aa5.18□□□□□ -1.58
VPS33B-207ENST00000557470 VDAC3Q9Y277 283 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms