RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 IGHV1-18A0A0C4DH31 117 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 TMEM129A0AVI4 362 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 TRIM49D1C9J1S8 452 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 TMPRSS2O15393 492 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 EIF4E2O60573 245 aaKnown RBP10.9□□□□□ -0.66
PSEN1-221ENST00000557293 HMGN2P05204 90 aaKnown RBP10.9□□□□□ -0.66
PSEN1-221ENST00000557293 DAOP14920 347 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 EFNA1P20827 205 aaPredicted RBP10.9□□□□□ -0.66
PSEN1-221ENST00000557293 IDH3GP51553 393 aaPredicted RBP10.9□□□□□ -0.66
PSEN1-221ENST00000557293 PRKAA2P54646 552 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 SESN3P58005 492 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 SNRPD2P62316 118 aaKnown RBP10.9□□□□□ -0.66
PSEN1-221ENST00000557293 LCP2Q13094 533 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 PDE7AQ13946 482 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 EFNB3Q15768 340 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 TSPO2Q5TGU0 170 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 C3orf33Q6P1S2 294 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 C1orf229Q6ZS94 237 aaPredicted RBP10.9□□□□□ -0.66
PSEN1-221ENST00000557293 SLC46A3Q7Z3Q1 461 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 ZNF786Q8N393 782 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 C17orf78Q8N4C9 275 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 C1orf162Q8NEQ5 155 aaPredicted RBP10.9□□□□□ -0.66
PSEN1-221ENST00000557293 RFWD2Q8NHY2 731 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 DCAKDQ8WVC6 231 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 L3HYPDHQ96EM0 354 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 ARL5BQ96KC2 179 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 SNX18Q96RF0 628 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 STACQ99469 402 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 DOK1Q99704 481 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 THUMPD3Q9BV44 507 aaKnown RBP10.9□□□□□ -0.66
PSEN1-221ENST00000557293 HOXD1Q9GZZ0 328 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 ZNF696Q9H7X3 374 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 ACSS1Q9NUB1 689 aaPredicted RBP10.9□□□□□ -0.66
PSEN1-221ENST00000557293 ZDHHC18Q9NUE0 388 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 EMC3Q9P0I2 261 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 DTNAQ9Y4J8 743 aa10.9□□□□□ -0.66
PSEN1-221ENST00000557293 LYNX1G3V0Z9 82 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 GPR171O14626 319 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 KLF11O14901 512 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 ZNF264O43296 627 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 ZSCAN12O43309 604 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 AKAP10O43572 662 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 MRPL33O75394 65 aaKnown RBP10.89□□□□□ -0.67
PSEN1-221ENST00000557293 RGS9O75916 674 aaPredicted RBP10.89□□□□□ -0.67
PSEN1-221ENST00000557293 OR4A8P0C604 315 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 LYNX1P0DP58 116 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 PPOXP50336 477 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 HILS1P60008 231 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 PRPS1P60891 318 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 CSNK2A1P68400 391 aaPredicted RBP10.89□□□□□ -0.67
PSEN1-221ENST00000557293 H3F3AP84243 136 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 SKP2Q13309 424 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 SYT14P1Q58G82 188 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 AWAT1Q58HT5 328 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 C1QTNF12Q5T7M4 302 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 CDC73Q6P1J9 531 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 SPATA19Q7Z5L4 167 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 DNAJA3Q96EY1 480 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 FCRL1Q96LA6 429 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 NAPGQ99747 312 aaPredicted RBP10.89□□□□□ -0.67
PSEN1-221ENST00000557293 LAT2Q9GZY6 243 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 REEP4Q9H6H4 257 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 MID1IP1Q9NPA3 183 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 CA10Q9NS85 328 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 ACER3Q9NUN7 267 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 SPEF1Q9Y4P9 236 aa10.89□□□□□ -0.67
PSEN1-221ENST00000557293 CENPVL1A0A0U1RR11 272 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 RSL1D1O76021 490 aaKnown RBP10.88□□□□□ -0.67
PSEN1-221ENST00000557293 PDE5AO76074 875 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 URI1O94763 535 aaPredicted RBP10.88□□□□□ -0.67
PSEN1-221ENST00000557293 PMS2P2O95744 297 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 TAC1P20366 129 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 ATP5F1P24539 256 aaPredicted RBP10.88□□□□□ -0.67
PSEN1-221ENST00000557293 ASMTP46597 345 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 SERPINB9P50453 376 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 GNG11P61952 73 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 HGFACQ04756 655 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 C2orf54Q08AI8 447 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 LASP1Q14847 261 aaKnown RBP10.88□□□□□ -0.67
PSEN1-221ENST00000557293 DCST2Q5T1A1 773 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 USP43Q70EL4 1123 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 SZRD1Q7Z422 152 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 CARM1Q86X55 608 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 ZIC4Q8N9L1 334 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 TOR1AIP2Q8NFQ8 470 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 ZFP28Q8NHY6 868 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 ST8SIA1Q92185 356 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 PAFAH2Q99487 392 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 RAB1BQ9H0U4 201 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 SH3BP4Q9P0V3 963 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 BAIAP2L1Q9UHR4 511 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 PCDHB10Q9UN67 800 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 UTP11Q9Y3A2 253 aaKnown RBP10.88□□□□□ -0.67
PSEN1-221ENST00000557293 FLVCR1Q9Y5Y0 555 aa10.88□□□□□ -0.67
PSEN1-221ENST00000557293 B4DSR2 109 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 H3BNH8 94 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 SEC22BO75396 215 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 AVPP01185 164 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 INHBAP08476 426 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 UBL4AP11441 157 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms