RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	C1GALT1C1	Q96EU7	318 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	CENPK	Q9BS16	269 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	TRMO	Q9BU70	441 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	RSPO3	Q9BXY4	272 aa	Predicted RBP	4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	MMP27	Q9H306	513 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR51B5	Q9H339	312 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	FKRP	Q9H9S5	495 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZBTB26	Q9HCK0	441 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	SAYSD1	Q9NPB0	183 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	MYNN	Q9NPC7	610 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	ESM1	Q9NQ30	184 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	ABHD10	Q9NUJ1	306 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	TMEM140	Q9NV12	185 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	EHD3	Q9NZN3	535 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	MED11	Q9P086	117 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	SCOC	Q9UIL1	159 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	FBXO9	Q9UK97	447 aa	Predicted RBP	4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	GRIP1	Q9Y3R0	1128 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	HEATR1	Q9H583	2144 aa	Known RBP	4.09	□□□□□ -1.76
SCFD1-223	ENST00000557076	WNK2	Q9Y3S1	2297 aa		4.09	□□□□□ -1.76
SCFD1-223	ENST00000557076	IGLV3-32	A0A0A0MS00	114 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076		A0A0A6YYD5	115 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076		A0A0J9YW62	118 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076		A0A1W2PS29	197 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	TCRBV7S3A2	A0A539	114 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	MIF4GD	A9UHW6	222 aa	Known RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	SAP18	O00422	153 aa	Known RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	PLPP1	O14494	284 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	CXCL13	O43927	109 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	TMPRSS11D	O60235	418 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	STK16	O75716	305 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	BCAS2	O75934	225 aa	Predicted RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	LYZL6	O75951	148 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	ZFPL1	O95159	310 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	ATP1B1	P05026	303 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	MSMB	P08118	114 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	CCDC175	P0C221	793 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	CT45A8	P0DMV1	189 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	CT45A9	P0DMV2	189 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	PF4V1	P10720	104 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	OSM	P13725	252 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	CPM	P14384	443 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	ANPEP	P15144	967 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	ZNF17	P17021	662 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	DDX5	P17844	614 aa	Known RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	PGC	P20142	388 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	COX5A	P20674	150 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	PRTN3	P24158	256 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	BSG	P35613	385 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	SERPINF1	P36955	418 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	OR3A2	P47893	321 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	IDH3G	P51553	393 aa	Predicted RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	BASP1	P80723	227 aa	Known RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	IRF8	Q02556	426 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	C17orf67	Q0P5P2	114 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	STK11	Q15831	433 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	NNAT	Q16517	81 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	CARTPT	Q16568	116 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	CCNG2	Q16589	344 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	C18orf21	Q32NC0	220 aa	Predicted RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	CT45A2	Q5DJT8	189 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	C6orf163	Q5TEZ5	329 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	OR52E8	Q6IFG1	317 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	PPP4R4	Q6NUP7	873 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	MED27	Q6P2C8	311 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	SHQ1	Q6PI26	577 aa	Known RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	SLC43A2	Q8N370	569 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	TCAIM	Q8N3R3	496 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	FITM2	Q8N6M3	262 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	ZNF433	Q8N7K0	673 aa	Predicted RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	LRRC57	Q8N9N7	239 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	OR2V1	Q8NHB1	315 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	TSPEAR	Q8WU66	669 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	HOXB13	Q92826	284 aa	Predicted RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	ERP27	Q96DN0	273 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	FAHD2A	Q96GK7	314 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	REXO5	Q96IC2	774 aa	Known RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	LRGUK	Q96M69	825 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	MUS81	Q96NY9	551 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	SNX18	Q96RF0	628 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	EGFL8	Q99944	293 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	FAM167B	Q9BTA0	163 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	SORBS1	Q9BX66	1292 aa	Known RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	ZNF717	Q9BY31	904 aa	Predicted RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	ITPA	Q9BY32	194 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	QRSL1	Q9H0R6	528 aa	Known RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	RAB1B	Q9H0U4	201 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	CNOT10	Q9H9A5	744 aa	Known RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	HHATL	Q9HCP6	504 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	TIGAR	Q9NQ88	270 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	IARS2	Q9NSE4	1012 aa	Known RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	KLHL13	Q9P2N7	655 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	BCAP29	Q9UHQ4	241 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	PSME2	Q9UL46	239 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	OARD1	Q9Y530	152 aa		4.08	□□□□□ -1.76
SCFD1-223	ENST00000557076	MMP24	Q9Y5R2	645 aa		4.08	□□□□□ -1.76

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