RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 GSTA4O15217 222 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 UBOX5O94941 541 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 CALB2P22676 271 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 HTR2AP28223 471 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 TACR3P29371 465 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 CPOXP36551 454 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 EIF1AXP47813 144 aaKnown RBP15.73■□□□□ 0.11
SHMT2-225ENST00000556798 KCNJ5P48544 419 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 MNAT1P51948 309 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 ZNF136P52737 540 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 DLX5P56178 289 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 RGS8P57771 180 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-225ENST00000556798 CTU2Q2VPK5 515 aaKnown RBP15.73■□□□□ 0.11
SHMT2-225ENST00000556798 C16orf89Q6UX73 402 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 RINLQ6ZS11 566 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 FAM156AQ8NDB6 213 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 RBM15BQ8NDT2 890 aaKnown RBP15.73■□□□□ 0.11
SHMT2-225ENST00000556798 BHLHE22Q8NFJ8 381 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-225ENST00000556798 VANGL1Q8TAA9 524 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-225ENST00000556798 ADGRG7Q96K78 797 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 KLHL15Q96M94 604 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 ARHGDIGQ99819 225 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 KLHL28Q9NXS3 571 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 CLCF1Q9UBD9 225 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 STOML1Q9UBI4 398 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 BAHCC1Q9P281 2608 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 DOPEY1Q5JWR5 2465 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 TMED7-TICAM2A0A0A6YYA0 188 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 CXCR6O00574 342 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 HOXD4P09016 255 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-225ENST00000556798 NCK1P16333 377 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 TCN1P20061 433 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-225ENST00000556798 KDELR2P33947 212 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 APOBEC1P41238 236 aaKnown RBP15.72■□□□□ 0.11
SHMT2-225ENST00000556798 SLC1A3P43003 542 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 COPZ1P61923 177 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 TMEM176BQ3YBM2 270 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-225ENST00000556798 CYBRD1Q53TN4 286 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 NSUN5P2Q63ZY6 315 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 WBP2NLQ6ICG8 309 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 TMEM211Q6ICI0 200 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 PPP4R4Q6NUP7 873 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 C3orf33Q6P1S2 294 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 MTFR2Q6P444 385 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 ESPNLQ6ZVH7 1005 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 CHMP1BQ7LBR1 199 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 LACC1Q8IV20 430 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 TNIP2Q8NFZ5 429 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 OR10Q1Q8NGQ4 319 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 OR10D3Q8NH80 312 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 SLC35B4Q969S0 331 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 DNAJA3Q96EY1 480 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 CDRT15Q96T59 188 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 SERINC1Q9NRX5 453 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 NDE1Q9NXR1 346 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 EGFL7Q9UHF1 273 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 OSGIN1Q9UJX0 560 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 TMED7Q9Y3B3 224 aa15.72■□□□□ 0.11
SHMT2-225ENST00000556798 A0A1W2PNR3 127 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 CD8B2A6NJW9 211 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 SYT5O00445 386 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 CXCL13O43927 109 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 TOXO94900 526 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 TGM6O95932 706 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 LGI1O95970 557 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 FESP07332 822 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 TNFRSF1BP20333 461 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 POLR2HP52434 150 aaKnown RBP15.71■□□□□ 0.11
SHMT2-225ENST00000556798 RPS3AP61247 264 aaKnown RBP15.71■□□□□ 0.11
SHMT2-225ENST00000556798 NCALDP61601 193 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 SF3B4Q15427 424 aaKnown RBP eCLIP15.71■□□□□ 0.115e-9■■■■□ 21
SHMT2-225ENST00000556798 SGCBQ16585 318 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 NRF1Q16656 503 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 HBMQ6B0K9 141 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 MRGPRGQ86SM5 289 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 ADGRE4PQ86SQ3 457 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 ADGRG3Q86Y34 549 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 RBM45Q8IUH3 476 aaKnown RBP15.71■□□□□ 0.11
SHMT2-225ENST00000556798 CCDC71Q8IV32 467 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-225ENST00000556798 C9orf106Q8NAJ2 232 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 OR52E4Q8NGH9 312 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 OR4D11Q8NGI4 311 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 OR2V1Q8NHB1 315 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 ITLN2Q8WWU7 325 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-225ENST00000556798 RND1Q92730 232 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 OR11A1Q9GZK7 315 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 COQ10BQ9H8M1 238 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 CHRNA9Q9UGM1 479 aa15.71■□□□□ 0.11
SHMT2-225ENST00000556798 COL12A1Q99715 3063 aa15.71■□□□□ 0.1
SHMT2-225ENST00000556798 A0A0G2JNJ9 132 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 TMEM72A0PK05 275 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 WIPF3A6NGB9 483 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 SLC22A20A6NK97 555 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 GJE1A6NN92 205 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 TMEM229AB2RXF0 380 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 ADAMDEC1O15204 470 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 TPST2O60704 377 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 IFNA14P01570 189 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 TFPIP10646 304 aa15.7■□□□□ 0.1
SHMT2-225ENST00000556798 GGT1P19440 569 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms