RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 CDC42P60953 191 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 ISL1P61371 349 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 RPP38P78345 283 aaKnown RBP13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 EBPQ15125 230 aaKnown RBP13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 ENTPD8Q5MY95 495 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 C6orf141Q5SZD1 244 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 PRAMEF17Q5VTA0 474 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 CLIP4Q8N3C7 705 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 BCORP1Q8N888 145 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 SLC38A9Q8NBW4 561 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 OR4K5Q8NGD3 323 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 OR9Q2Q8NGE9 314 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 PIGXQ8TBF5 258 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 GNPDA2Q8TDQ7 276 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 ZG16BQ96DA0 208 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 SLC41A3Q96GZ6 507 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 MPP4Q96JB8 637 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 RSPO3Q9BXY4 272 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 OR8D2Q9GZM6 311 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 EXOSC3Q9NQT5 275 aaKnown RBP13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 SLC22A11Q9NSA0 550 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 CTSFQ9UBX1 484 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 TMEM5Q9Y2B1 443 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 TPRKBQ9Y3C4 175 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 CHST2Q9Y4C5 530 aa13.03□□□□□ -0.32
TRAPPC6B-206ENST00000556765 VPS13CQ709C8 3753 aa13.02□□□□□ -0.32
TRAPPC6B-206ENST00000556765 A0A1W2PQD3 144 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 C19orf84I3L1E1 186 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 MITFO75030 526 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 IGHEP01854 428 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 OTX2P32243 289 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 RBM34P42696 430 aaKnown RBP13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CLK3P49761 638 aaKnown RBP13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 ZNF136P52737 540 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CRISP1P54107 249 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 EMP2P54851 167 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 NRG3P56975 720 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 IL5RAQ01344 420 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 LAPTM4AQ15012 233 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 DCAF10Q5QP82 559 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 PDZK1Q5T2W1 519 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 MRPL14Q6P1L8 145 aaKnown RBP13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 PGBD2Q6P3X8 592 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 MTFR2Q6P444 385 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 PODNL1Q6PEZ8 512 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 TMEM205Q6UW68 189 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 ZNF730Q6ZMV8 503 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 ANKRD37Q7Z713 158 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 MRGPREQ86SM8 312 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 COMTD1Q86VU5 262 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 RBM45Q8IUH3 476 aaKnown RBP13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SLC43A2Q8N370 569 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 LSMEM1Q8N8F7 131 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 B3GNT7Q8NFL0 401 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 OR5L2Q8NGL0 311 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 NUBPLQ8TB37 319 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 TRUB1Q8WWH5 349 aaKnown RBP13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 ADIPOR1Q96A54 375 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 VMP1Q96GC9 406 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 FER1L6-AS2Q96M78 137 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 LPAR4Q99677 370 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 NIPSNAP1Q9BPW8 284 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 TEX12Q9BXU0 123 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 GSX1Q9H4S2 264 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 MAN2C1Q9NTJ4 1040 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SCN3BQ9NY72 215 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 ABCA4P78363 2273 aa13.02□□□□□ -0.33
TRAPPC6B-206ENST00000556765 TRGV8A0A0C4DH27 118 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SERINC4A6NH21 518 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CPSF4LA6NMK7 179 aaKnown RBP13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 ZAR1LA6NP61 321 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 HRKO00198 91 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 PEX12O00623 359 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SCDO00767 359 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SEC24DO94855 1032 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CLIC3O95833 236 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 ANGPTL1O95841 491 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 GASTP01350 101 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 HPGDP15428 266 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 IL12BP29460 328 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 PNLIPRP2P54317 469 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CD47Q08722 323 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 TSPAN31Q12999 210 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 MAPK14Q16539 360 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 RPL13AP3Q6NVV1 102 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 KLHL17Q6TDP4 642 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 FAM180AQ6UWF9 173 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 FAM198BQ6UWH4 519 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 MBOAT2Q6ZWT7 520 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 OLIG3Q7RTU3 272 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 P3H2Q8IVL5 708 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SHISA5Q8N114 240 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CLDN22Q8N7P3 220 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 IPCEF1Q8WWN9 437 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 WWTR1Q9GZV5 400 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SOX17Q9H6I2 414 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 IMPAD1Q9NX62 359 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 DNAJB12Q9NXW2 375 aaKnown RBP13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SELENONQ9NZV5 590 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 RHCGQ9UBD6 479 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms