RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 C3orf49Q96BT1 292 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 VMP1Q96GC9 406 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 LPAR4Q99677 370 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 WDR77Q9BQA1 342 aaPredicted RBP13.47□□□□□ -0.25
VPS33B-205ENST00000556096 CRB3Q9BUF7 120 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 SLC19A3Q9BZV2 496 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 TOR4AQ9NXH8 423 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 CARD8Q9Y2G2 431 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 OR6C70A6NIJ9 312 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 B4E171 279 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 BHLHE40O14503 412 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 OIP5O43482 229 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 EIF4E2O60573 245 aaKnown RBP13.47□□□□□ -0.25
VPS33B-205ENST00000556096 PPM1BO75688 479 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 IGF2P01344 180 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 KLK3P07288 261 aaPredicted RBP13.47□□□□□ -0.25
VPS33B-205ENST00000556096 SAGP10523 405 aaPredicted RBP13.47□□□□□ -0.25
VPS33B-205ENST00000556096 PNMTP11086 282 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 CCL4P13236 92 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 TSPAN7P41732 249 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 NRG3P56975 720 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 AADACL4Q5VUY2 407 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 ZNF367Q7RTV3 350 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 LNX2Q8N448 690 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 ANKK1Q8NFD2 765 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 PLEKHA8Q96JA3 519 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 CDC6Q99741 560 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 GPN3Q9UHW5 284 aaPredicted RBP13.47□□□□□ -0.25
VPS33B-205ENST00000556096 BAIAP2Q9UQB8 552 aa13.47□□□□□ -0.25
VPS33B-205ENST00000556096 KIF26BQ2KJY2 2108 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 DCHS1Q96JQ0 3298 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 PCNX2A6NKB5 2137 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 M0R082 166 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 PTHP01270 115 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 ADRA2AP08913 450 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 ZNF28P17035 718 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 FUT1P19526 365 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 NFATC3Q12968 1075 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 CTF1Q16619 201 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 TIGD6Q17RP2 521 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 CBLN3Q6UW01 205 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 P2RY8Q86VZ1 359 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 OR13C2Q8NGS9 318 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 RFKQ969G6 155 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 FN3KQ9H479 309 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 C12orf10Q9HB07 376 aa13.46□□□□□ -0.25
VPS33B-205ENST00000556096 AKAP7Q9P0M2 348 aaPredicted RBP13.46□□□□□ -0.25
VPS33B-205ENST00000556096 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.46□□□□□ -0.25
VPS33B-205ENST00000556096 DIMT1Q9UNQ2 313 aaKnown RBP13.46□□□□□ -0.25
VPS33B-205ENST00000556096 A0A1W2PPW3 197 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 ENO4A6NNW6 628 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 NDUFB5O43674 189 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 FADS1O60427 444 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 CH25HO95992 272 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 FTH1P19P0C7X4 201 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 CSRP1P21291 193 aaKnown RBP13.45□□□□□ -0.26
VPS33B-205ENST00000556096 TGFBR2P37173 567 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 SLC9A3P48764 834 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 CRYZQ08257 329 aaKnown RBP13.45□□□□□ -0.26
VPS33B-205ENST00000556096 RAB40BQ12829 278 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 EFR3AQ14156 821 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 DESI1Q6ICB0 168 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 DHRS13Q6UX07 377 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 ZNF517Q6ZMY9 492 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-205ENST00000556096 RTL4Q6ZR62 310 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 ATG4DQ86TL0 474 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-205ENST00000556096 OAFQ86UD1 273 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 MARCH9Q86YJ5 346 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 OR5L2Q8NGL0 311 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 SGTBQ96EQ0 304 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 CMKLR1Q99788 373 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 TMEM43Q9BTV4 400 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 TBL1XR1Q9BZK7 514 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 RACGAP1Q9H0H5 632 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 ENKD1Q9H0I2 346 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 AKIRIN1Q9H9L7 192 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-205ENST00000556096 FGF20Q9NP95 211 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-205ENST00000556096 SLC39A1Q9NY26 324 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 GPR52Q9Y2T5 361 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 NPFFR2Q9Y5X5 522 aa13.45□□□□□ -0.26
VPS33B-205ENST00000556096 CNOT1A5YKK6 2376 aaKnown RBP13.45□□□□□ -0.26
VPS33B-205ENST00000556096 LOC102723996A0A087X1L8 192 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 RAB36O95755 333 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 CD36P16671 472 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 NAGAP17050 411 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 LIPAP38571 399 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 GAS1P54826 345 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 SLC26A5P58743 744 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 ZNF117Q03924 483 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 FHL1Q13642 323 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 NXNL2Q5VZ03 156 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 THSD4Q6ZMP0 1018 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 MARCH3Q86UD3 253 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 TMCO5AQ8N6Q1 288 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 OR52I1Q8NGK6 324 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 MESP1Q9BRJ9 268 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 RTN4RQ9BZR6 473 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 ADAM19Q9H013 955 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 IL20RAQ9UHF4 553 aa13.44□□□□□ -0.26
VPS33B-205ENST00000556096 ERGIC3Q9Y282 383 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms