RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 CHD6Q8TD26 2715 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 TMED7-TICAM2A0A0A6YYA0 188 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 A0A1B0GWA3 101 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 ELOA3DA6NLF2 546 aaPredicted RBP6.9□□□□□ -1.3
TDP1-214ENST00000556063 AHRRA9YTQ3 701 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 B4DXG7 233 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 H3BML4 177 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 SLC19A2O60779 497 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 WDR1O75083 606 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 NTN1O95631 604 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 EPPINO95925 133 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 GPIP06744 558 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 TPOP07202 933 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 TFPIP10646 304 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 THRBP10828 461 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 PRG2P13727 222 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 GABRA1P14867 456 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 CPN1P15169 458 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 SLC7A1P30825 629 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 OR1E2P47887 323 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 GFRA1P56159 465 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 SMIM11AP58511 58 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 B3GALT5-AS1P59052 145 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 TAS2R41P59536 307 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 HOXC5Q00444 222 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 MS4A2Q01362 244 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 PLAURQ03405 335 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 CRYZQ08257 329 aaKnown RBP6.9□□□□□ -1.3
TDP1-214ENST00000556063 ST3GAL3Q11203 375 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 OR1Q1Q15612 314 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 TOMM34Q15785 309 aaPredicted RBP6.9□□□□□ -1.3
TDP1-214ENST00000556063 ELOA3BQ3SY89 546 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 ALG10BQ5I7T1 473 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 ENTPD8Q5MY95 495 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 C3orf33Q6P1S2 294 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 POMZP3Q6PJE2 187 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 C5orf46Q6UWT4 87 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 ESPNLQ6ZVH7 1005 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 VTCN1Q7Z7D3 282 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 SPATA24Q86W54 205 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 LILRA2Q8N149 483 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 ELOA3Q8NG57 546 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 FAM57AQ8TBR7 257 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 SMPDL3BQ92485 455 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 MIB2Q96AX9 1013 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 DDIT4LQ96D03 193 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 MPP4Q96JB8 637 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 PRRC1Q96M27 445 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 EPYCQ99645 322 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 TIMP4Q99727 224 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 ADAM19Q9H013 955 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 MAGIXQ9H6Y5 334 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 YY1AP1Q9H869 796 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 TIGARQ9NQ88 270 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 CTPS2Q9NRF8 586 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 PAQR5Q9NXK6 330 aaPredicted RBP6.9□□□□□ -1.3
TDP1-214ENST00000556063 ALKBH4Q9NXW9 302 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 OSGIN1Q9UJX0 560 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 CAMK2AQ9UQM7 478 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 POMPQ9Y244 141 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 TMED7Q9Y3B3 224 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 ZNF337Q9Y3M9 751 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 LIPGQ9Y5X9 500 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 ENPP4Q9Y6X5 453 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 V9GYQ6 96 aa6.9□□□□□ -1.3
TDP1-214ENST00000556063 ASPMQ8IZT6 3477 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 HIVEP3Q5T1R4 2406 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 A0A0B4J2E0 115 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 A0A1B0GX12 115 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 CPSF4LA6NMK7 179 aaKnown RBP6.89□□□□□ -1.31
TDP1-214ENST00000556063 A8MVM7 634 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 H0Y3Z8 333 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 ACOT8O14734 319 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 SEC14L5O43304 696 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 ZNF208O43345 1280 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 CHP2O43745 196 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 ADAM11O75078 769 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 C1QL1O75973 258 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 OR5F1O95221 314 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 ZNF708P17019 499 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 RHCEP18577 417 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 CCNA2P20248 432 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 TNFRSF1BP20333 461 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 ATP6V1B2P21281 511 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 PSMA4P25789 261 aaKnown RBP6.89□□□□□ -1.31
TDP1-214ENST00000556063 HTR2AP28223 471 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 SFTPDP35247 375 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 STARP49675 285 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 CSNK2A1P68400 391 aaPredicted RBP6.89□□□□□ -1.31
TDP1-214ENST00000556063 FOXK1P85037 733 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 HSF1Q00613 529 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 SRYQ05066 204 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 SGCBQ16585 318 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 TMEM176BQ3YBM2 270 aaPredicted RBP6.89□□□□□ -1.31
TDP1-214ENST00000556063 GXYLT1Q4G148 440 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 SYT14P1Q58G82 188 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 COMTD1Q86VU5 262 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 ADGRG3Q86Y34 549 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 UBQLNLQ8IYU4 475 aa6.89□□□□□ -1.31
TDP1-214ENST00000556063 ATP6V1C2Q8NEY4 427 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms