RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 YAP1P46937 504 aaKnown RBP11.28□□□□□ -0.6
SHMT2-221ENST00000555773 CLK1P49759 484 aaKnown RBP11.28□□□□□ -0.6
SHMT2-221ENST00000555773 ERFP50548 548 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 HMGA2P52926 109 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 CDH12P55289 794 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 GFRA1P56159 465 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 B3GALT5-AS1P59052 145 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 RAC1P63000 192 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 FOXF1Q12946 379 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 DGCR6Q14129 220 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 GK3PQ14409 553 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 BCL2A1Q16548 175 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 CMPK2Q5EBM0 449 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 NHSL2Q5HYW2 709 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 ALG10BQ5I7T1 473 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 WIPI1Q5MNZ9 446 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-221ENST00000555773 RAET1LQ5VY80 246 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 ZNF324BQ6AW86 544 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-221ENST00000555773 GDF7Q7Z4P5 450 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 ATG4DQ86TL0 474 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-221ENST00000555773 ADGRG3Q86Y34 549 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 OFCC1Q8IZS5 231 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 NEIL3Q8TAT5 605 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 POC1BQ8TC44 478 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 STMN2Q93045 179 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 DHRS1Q96LJ7 313 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 HS6ST2Q96MM7 605 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 SFXN2Q96NB2 322 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 BARD1Q99728 777 aaKnown RBP11.28□□□□□ -0.6
SHMT2-221ENST00000555773 LDAHQ9H6V9 325 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 NMNAT1Q9HAN9 279 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-221ENST00000555773 CTPS2Q9NRF8 586 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 LUZP4Q9P127 313 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 NPIPA1Q9UND3 350 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 NTNG1Q9Y2I2 539 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 RPH3AQ9Y2J0 694 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-221ENST00000555773 SPIN1Q9Y657 262 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-221ENST00000555773 AP4B1Q9Y6B7 739 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 EXPH5Q8NEV8 1989 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 ATMQ13315 3056 aa11.28□□□□□ -0.6
SHMT2-221ENST00000555773 ITPR1Q14643 2758 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 TMED7-TICAM2A0A0A6YYA0 188 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 HTR3EA5X5Y0 456 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 ELOA3DA6NLF2 546 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-221ENST00000555773 TTLL8A6PVC2 850 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 J3KTA2 159 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 LYPD3O95274 346 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 CST1P01037 141 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 H1F0P07305 194 aaKnown RBP11.27□□□□□ -0.61
SHMT2-221ENST00000555773 CELA3AP09093 270 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 FASP25445 335 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 RBM34P42696 430 aaKnown RBP11.27□□□□□ -0.61
SHMT2-221ENST00000555773 ELF3P78545 371 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-221ENST00000555773 SELENBP1Q13228 472 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 TRAM2Q15035 370 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 ELOA3BQ3SY89 546 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 COLEC12Q5KU26 742 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 OR2T5Q6IEZ7 315 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 LINC00114Q6XXX2 140 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 TRILQ7L0X0 811 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 ZNF605Q86T29 641 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 TSPYL5Q86VY4 417 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-221ENST00000555773 ELOA3Q8NG57 546 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 OR2T29Q8NH02 315 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 STK35Q8TDR2 534 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 SLC25A43Q8WUT9 341 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-221ENST00000555773 SNRNP40Q96DI7 357 aaKnown RBP11.27□□□□□ -0.61
SHMT2-221ENST00000555773 GPR137Q96N19 417 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 EXO5Q9H790 373 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 S100A14Q9HCY8 104 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 DNAJB9Q9UBS3 223 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 CHRNA9Q9UGM1 479 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 SLC7A7Q9UM01 511 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 TMED7Q9Y3B3 224 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 ZNF337Q9Y3M9 751 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 ATRXP46100 2492 aa11.27□□□□□ -0.61
SHMT2-221ENST00000555773 TNRC6AQ8NDV7 1962 aaKnown RBP11.27□□□□□ -0.61
SHMT2-221ENST00000555773 GJE1A6NN92 205 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 A8MVM7 634 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 H0YHG0 523 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 AQP7O14520 342 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 GNGT2O14610 69 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 CLOCKO15516 846 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 EFNA2O43921 213 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 DEAF1O75398 565 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-221ENST00000555773 DIRAS1O95057 198 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 GADD45GO95257 159 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 THY1P04216 161 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 PEPDP12955 493 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 FOXK1P85037 733 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 NFATC3Q12968 1075 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 VASNQ6EMK4 673 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 C3orf33Q6P1S2 294 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 ARHGAP11AQ6P4F7 1023 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 C5orf46Q6UWT4 87 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 RNF113BQ8IZP6 322 aaKnown RBP11.26□□□□□ -0.61
SHMT2-221ENST00000555773 GHDCQ8N2G8 530 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 RNF217Q8TC41 542 aa11.26□□□□□ -0.61
SHMT2-221ENST00000555773 PYDC1Q8WXC3 89 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms