RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 AGTR1P30556 359 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 CD79BP40259 229 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 IDH2P48735 452 aaKnown RBP18.3■□□□□ 0.52
VTI1B-205ENST00000555543 CTBP2P56545 445 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 IRX1P78414 480 aaPredicted RBP18.3■□□□□ 0.52
VTI1B-205ENST00000555543 FADDQ13158 208 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 DAZAP2Q15038 168 aaPredicted RBP18.3■□□□□ 0.52
VTI1B-205ENST00000555543 SYT14P1Q58G82 188 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 FCRLAQ7L513 359 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 GRINAQ7Z429 371 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 LURAP1LQ8IV03 231 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 OR52P1PQ8NH57 321 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 IKZF5Q9H5V7 419 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 A4GALTQ9NPC4 353 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 TIGARQ9NQ88 270 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 PLSCR4Q9NRQ2 329 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 GLRX2Q9NS18 164 aa18.3■□□□□ 0.52
VTI1B-205ENST00000555543 THUMPD1Q9NXG2 353 aaKnown RBP18.3■□□□□ 0.52
VTI1B-205ENST00000555543 A0A1W2PP18 115 aa18.29■□□□□ 0.52
VTI1B-205ENST00000555543 SH3D21A4FU49 640 aa18.29■□□□□ 0.52
VTI1B-205ENST00000555543 CDHR4A6H8M9 788 aa18.29■□□□□ 0.52
VTI1B-205ENST00000555543 APOBEC1P41238 236 aaKnown RBP18.29■□□□□ 0.52
VTI1B-205ENST00000555543 GNA13Q14344 377 aa18.29■□□□□ 0.52
VTI1B-205ENST00000555543 LIN52Q52LA3 116 aa18.29■□□□□ 0.52
VTI1B-205ENST00000555543 CGB2Q6NT52 195 aa18.29■□□□□ 0.52
VTI1B-205ENST00000555543 REXO5Q96IC2 774 aaKnown RBP18.29■□□□□ 0.52
VTI1B-205ENST00000555543 SIKE1Q9BRV8 207 aa18.29■□□□□ 0.52
VTI1B-205ENST00000555543 TMEM120AQ9BXJ8 343 aa18.29■□□□□ 0.52
VTI1B-205ENST00000555543 POLDIP3Q9BY77 421 aaKnown RBP18.29■□□□□ 0.52
VTI1B-205ENST00000555543 CLEC4MQ9H2X3 399 aaPredicted RBP18.29■□□□□ 0.52
VTI1B-205ENST00000555543 RAD21L1Q9H4I0 556 aa18.29■□□□□ 0.52
VTI1B-205ENST00000555543 SERINC1Q9NRX5 453 aa18.29■□□□□ 0.52
VTI1B-205ENST00000555543 CHRNA9Q9UGM1 479 aa18.29■□□□□ 0.52
VTI1B-205ENST00000555543 ZNF443Q9Y2A4 671 aaPredicted RBP18.29■□□□□ 0.52
VTI1B-205ENST00000555543 CHST2Q9Y4C5 530 aa18.29■□□□□ 0.52
VTI1B-205ENST00000555543 TESMINQ9Y4I5 508 aa18.29■□□□□ 0.52
VTI1B-205ENST00000555543 AKAP6Q13023 2319 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 CFAP73A6NFT4 308 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 SMAD9O15198 467 aaKnown RBP18.28■□□□□ 0.52
VTI1B-205ENST00000555543 GKN3PP0CG01 181 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 POU2F1P14859 743 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 UGT2B10P36537 528 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 KCNJ5P48544 419 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 PCYT1AP49585 367 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 RAC3P60763 192 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 EPS8Q12929 822 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 EXOC3L2Q2M3D2 409 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 DLEU7Q6UYE1 221 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 RETREG3Q86VR2 466 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 ADGRG3Q86Y34 549 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 SLC25A43Q8WUT9 341 aaPredicted RBP18.28■□□□□ 0.52
VTI1B-205ENST00000555543 DNAJA3Q96EY1 480 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 ARL5BQ96KC2 179 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 DACH2Q96NX9 599 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 OR11A1Q9GZK7 315 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 RABEP2Q9H5N1 569 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 C12orf49Q9H741 205 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 FGFR1OP2Q9NVK5 253 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 ING1Q9UK53 422 aaPredicted RBP18.28■□□□□ 0.52
VTI1B-205ENST00000555543 GMEB1Q9Y692 573 aa18.28■□□□□ 0.52
VTI1B-205ENST00000555543 A0A0G2JPF8 293 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 HNRNPCL2B2RXH8 293 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 HNRNPCL3B7ZW38 293 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 FAAHO00519 579 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 HNRNPCL1O60812 293 aaKnown RBP18.27■□□□□ 0.52
VTI1B-205ENST00000555543 PABPC4LP0CB38 370 aaKnown RBP18.27■□□□□ 0.52
VTI1B-205ENST00000555543 HNRNPCL4P0DMR1 293 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 DIO1P49895 249 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 SF3A3Q12874 501 aaKnown RBP eCLIP18.27■□□□□ 0.52
VTI1B-205ENST00000555543 RNPS1Q15287 305 aaKnown RBP18.27■□□□□ 0.52
VTI1B-205ENST00000555543 RNF220Q5VTB9 566 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 NUFIP2Q7Z417 695 aaKnown RBP18.27■□□□□ 0.52
VTI1B-205ENST00000555543 TUSC5Q8IXB3 177 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 CLIP4Q8N3C7 705 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 WFIKKN1Q96NZ8 548 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 CPPED1Q9BRF8 314 aaPredicted RBP18.27■□□□□ 0.52
VTI1B-205ENST00000555543 SLC39A3Q9BRY0 314 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 RSPO3Q9BXY4 272 aaPredicted RBP18.27■□□□□ 0.52
VTI1B-205ENST00000555543 BCL2L10Q9HD36 194 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 KLHL28Q9NXS3 571 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 ELOVL5Q9NYP7 299 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 KLHL13Q9P2N7 655 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 OSGIN1Q9UJX0 560 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 TRIM33Q9UPN9 1127 aa18.27■□□□□ 0.52
VTI1B-205ENST00000555543 ABCA4P78363 2273 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 TMED7-TICAM2A0A0A6YYA0 188 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 TMEM247A6NEH6 219 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 ATP8B1O43520 1251 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 FESP07332 822 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 THBS1P07996 1170 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 ARAFP10398 606 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 TFPIP10646 304 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 PRG2P13727 222 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 CCNA2P20248 432 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 ACAA2P42765 397 aaKnown RBP18.26■□□□□ 0.51
VTI1B-205ENST00000555543 GUCY1A3Q02108 690 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 GCNT6Q5T4J0 391 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 PRAMEF8Q5VWM4 474 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 PRAMEF7Q5VXH5 474 aa18.26■□□□□ 0.51
VTI1B-205ENST00000555543 GTF2IRD2BQ6EKJ0 949 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms