RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 STK11Q15831 433 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 LDLRAP1Q5SW96 308 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 LIPNQ5VXI9 398 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 NANOGP8Q6NSW7 305 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 NEK5Q6P3R8 708 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 WDR88Q6ZMY6 472 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 LINC01561Q8N1V8 128 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 NKAIN3Q8N8D7 197 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 LEMD2Q8NC56 503 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 TMEM185AQ8NFB2 350 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 M1APQ8TC57 530 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 PTP4A1Q93096 173 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 TAAR1Q96RJ0 339 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 SIRPDQ9H106 197 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 PLGRKTQ9HBL7 147 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 TREM2Q9NZC2 230 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 FETUBQ9UGM5 382 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 TDRKHQ9Y2W6 561 aaKnown RBP1.07□□□□□ -2.24
SRP54-207ENST00000555535 STRAPQ9Y3F4 350 aaKnown RBP1.07□□□□□ -2.24
SRP54-207ENST00000555535 MAD1L1Q9Y6D9 718 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 NUP214P35658 2090 aaPredicted RBP1.07□□□□□ -2.24
SRP54-207ENST00000555535 FRMPD3Q5JV73 1810 aa1.07□□□□□ -2.24
SRP54-207ENST00000555535 IGHV3OR16-13A0A075B7E8 117 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 A0A0G2JN53 185 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 E9PMD0 336 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 SGK494L7N484 410 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 MSH4O15457 936 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 VEGFDO43915 354 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 KINO60870 393 aaKnown RBP1.06□□□□□ -2.24
SRP54-207ENST00000555535 KERAO60938 352 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 ECI2O75521 394 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 NDUFA7O95182 113 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 GOSR1O95249 250 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 LALBAP00709 142 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 RNH1P13489 461 aaKnown RBP1.06□□□□□ -2.24
SRP54-207ENST00000555535 ATP5A1P25705 553 aaKnown RBP1.06□□□□□ -2.24
SRP54-207ENST00000555535 PTPN6P29350 595 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 AKT2P31751 481 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 ACTN3Q08043 901 aaPredicted RBP1.06□□□□□ -2.24
SRP54-207ENST00000555535 RPA4Q13156 261 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 CBX3Q13185 183 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 PPP2R5CQ13362 524 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 LASP1Q14847 261 aaKnown RBP1.06□□□□□ -2.24
SRP54-207ENST00000555535 ZNF311Q5JNZ3 666 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 C1orf100Q5SVJ3 147 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 OR6B2Q6IFH4 312 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 FAM199XQ6PEV8 388 aaPredicted RBP1.06□□□□□ -2.24
SRP54-207ENST00000555535 C11orf88Q6PI97 169 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 TMEM184AQ6ZMB5 413 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 SHISA6Q6ZSJ9 500 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 ANKRD23Q86SG2 305 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 SNX32Q86XE0 403 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 CNTN4Q8IWV2 1026 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 FAM86B1Q8N7N1 296 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 PSMA8Q8TAA3 256 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 CABS1Q96KC9 395 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 ACAT2Q9BWD1 397 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 TRPV5Q9NQA5 729 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 BCAP29Q9UHQ4 241 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 CRLS1Q9UJA2 301 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 APPL1Q9UKG1 709 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 ZNF490Q9ULM2 529 aaPredicted RBP1.06□□□□□ -2.24
SRP54-207ENST00000555535 MMACHCQ9Y4U1 282 aa1.06□□□□□ -2.24
SRP54-207ENST00000555535 LTBP4Q8N2S1 1624 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 E9PBE3 544 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 H3BMQ9 156 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 P04436 131 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 ABHD2P08910 425 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 TLX1NBP0CAT3 122 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 H2AFXP16104 143 aaPredicted RBP1.05□□□□□ -2.24
SRP54-207ENST00000555535 CXCL5P42830 114 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 CHRNB3Q05901 458 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 KLHL30Q0D2K2 578 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 AP1B1Q10567 949 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 NDUFA9Q16795 377 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 RAET1LQ5VY80 246 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 LRRC70Q7Z2Q7 622 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 CAMK2N1Q7Z7J9 78 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 SPC24Q8NBT2 197 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 OR51S1Q8NGJ8 323 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 CNIH3Q8TBE1 160 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 MGARPQ8TDB4 240 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 FCGR1BQ92637 280 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 ARPC1AQ92747 370 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 UPRTQ96BW1 309 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 CCDC43Q96MW1 224 aaKnown RBP1.05□□□□□ -2.24
SRP54-207ENST00000555535 FOXC2Q99958 501 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 NDFIP1Q9BT67 221 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 C2orf40Q9H1Z8 148 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 MID1IP1Q9NPA3 183 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 HOMER3Q9NSC5 361 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 C1orf123Q9NWV4 160 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 SOHLH2Q9NX45 425 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 UBIAD1Q9Y5Z9 338 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 DHX29Q7Z478 1369 aaKnown RBP1.05□□□□□ -2.24
SRP54-207ENST00000555535 YEATS2Q9ULM3 1422 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 ABCC9O60706 1549 aa1.05□□□□□ -2.24
SRP54-207ENST00000555535 IGLV11-55A0A075B6I3 123 aa1.04□□□□□ -2.24
SRP54-207ENST00000555535 C7orf66A4D0T2 115 aa1.04□□□□□ -2.24
SRP54-207ENST00000555535 FAM74A7A6NL05 159 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms