RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 A0A0G2JPF8 293 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 HNRNPCL2B2RXH8 293 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 HNRNPCL3B7ZW38 293 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 FRS3O43559 492 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 HNRNPCL1O60812 293 aaKnown RBP12.2□□□□□ -0.46
SNX6-203ENST00000555416 PGM3O95394 542 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 HNRNPCL4P0DMR1 293 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 ARAFP10398 606 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 FCGR2AP12318 317 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 GPX2P18283 190 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 CCNA2P20248 432 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 CPOXP36551 454 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 IRX1P78414 480 aaPredicted RBP12.2□□□□□ -0.46
SNX6-203ENST00000555416 FADDQ13158 208 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 RUNDC3AQ59EK9 446 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 PDSS1Q5T2R2 415 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 C3orf33Q6P1S2 294 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 C22orf34Q6ZV56 151 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 NUFIP2Q7Z417 695 aaKnown RBP12.2□□□□□ -0.46
SNX6-203ENST00000555416 DPP10Q8N608 796 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 TMEM234Q8WY98 164 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 PMM1Q92871 262 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 GMPPAQ96IJ6 420 aaPredicted RBP12.2□□□□□ -0.46
SNX6-203ENST00000555416 ZNF317Q96PQ6 595 aaPredicted RBP12.2□□□□□ -0.46
SNX6-203ENST00000555416 GPATCH1Q9BRR8 931 aaKnown RBP12.2□□□□□ -0.46
SNX6-203ENST00000555416 SIKE1Q9BRV8 207 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 RABEP2Q9H5N1 569 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 BCL2L10Q9HD36 194 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 MED4Q9NPJ6 270 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 PAQR5Q9NXK6 330 aaPredicted RBP12.2□□□□□ -0.46
SNX6-203ENST00000555416 CALML5Q9NZT1 146 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 FOXD3Q9UJU5 478 aaPredicted RBP12.2□□□□□ -0.46
SNX6-203ENST00000555416 OSGIN1Q9UJX0 560 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 TRIM33Q9UPN9 1127 aa12.2□□□□□ -0.46
SNX6-203ENST00000555416 TMEM72A0PK05 275 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 ZC3H12DA2A288 527 aaKnown RBP12.19□□□□□ -0.46
SNX6-203ENST00000555416 FAM221AA4D161 298 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 CFAP73A6NFT4 308 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 TUBAL3A6NHL2 446 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 GJE1A6NN92 205 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 ZNF814B7Z6K7 855 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 SMAD9O15198 467 aaKnown RBP12.19□□□□□ -0.46
SNX6-203ENST00000555416 CTAG2O75638 210 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 TROVE2P10155 538 aaKnown RBP eCLIP12.19□□□□□ -0.46
SNX6-203ENST00000555416 CD8BP10966 210 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 EDNRAP25101 427 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 TACR3P29371 465 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 AGTR1P30556 359 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 SLC7A1P30825 629 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 MDH1P40925 334 aaKnown RBP12.19□□□□□ -0.46
SNX6-203ENST00000555416 DIO1P49895 249 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 ARFIP2P53365 341 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 MTPNP58546 118 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 RAC3P60763 192 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 HOXC5Q00444 222 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 SORDQ00796 357 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 CAPRIN1Q14444 709 aaKnown RBP12.19□□□□□ -0.46
SNX6-203ENST00000555416 LIN52Q52LA3 116 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 HSP90B2PQ58FF3 399 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 SYT14P1Q58G82 188 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 GCNT6Q5T4J0 391 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 METTL21CQ5VZV1 264 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 FCRLAQ7L513 359 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 GRINAQ7Z429 371 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 DHDDSQ86SQ9 333 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 SERPINA11Q86U17 422 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 KIF18BQ86Y91 864 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 PTOV1Q86YD1 416 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 TUSC5Q8IXB3 177 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 FAM222BQ8WU58 562 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 CPNE4Q96A23 557 aaPredicted RBP12.19□□□□□ -0.46
SNX6-203ENST00000555416 RAD21L1Q9H4I0 556 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 SAR1AQ9NR31 198 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 PLSCR4Q9NRQ2 329 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 THUMPD1Q9NXG2 353 aaKnown RBP12.19□□□□□ -0.46
SNX6-203ENST00000555416 CHRNA9Q9UGM1 479 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 LEF1Q9UJU2 399 aaPredicted RBP12.19□□□□□ -0.46
SNX6-203ENST00000555416 PROCRQ9UNN8 238 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 NDUFAF1Q9Y375 327 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 AKAP6Q13023 2319 aa12.19□□□□□ -0.46
SNX6-203ENST00000555416 MYO9AB2RTY4 2548 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 TMED7-TICAM2A0A0A6YYA0 188 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 A6NNC1 897 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 FAAHO00519 579 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 TPST1O60507 370 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 RAMP1O60894 148 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 GCM2O75603 506 aaPredicted RBP12.18□□□□□ -0.46
SNX6-203ENST00000555416 PLGP00747 810 aaPredicted RBP12.18□□□□□ -0.46
SNX6-203ENST00000555416 THBS1P07996 1170 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 PABPC4LP0CB38 370 aaKnown RBP12.18□□□□□ -0.46
SNX6-203ENST00000555416 TFPIP10646 304 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 CD79BP40259 229 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 APOBEC1P41238 236 aaKnown RBP12.18□□□□□ -0.46
SNX6-203ENST00000555416 CTBP2P56545 445 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 CDK6Q00534 326 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 KLF10Q13118 480 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 NFYCQ13952 458 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 EXOC3L2Q2M3D2 409 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 GLIPR1L2Q4G1C9 344 aa12.18□□□□□ -0.46
SNX6-203ENST00000555416 ZNF311Q5JNZ3 666 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms