RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 SIM1P81133 766 aaPredicted RBP7.88□□□□□ -1.15
LINC00641-201ENST00000555379 SMUG1Q53HV7 270 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 TMEM31Q5JXX7 168 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 CLEC12AQ5QGZ9 265 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 OR10R2Q8NGX6 335 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 LILRB1Q8NHL6 650 aaPredicted RBP7.88□□□□□ -1.15
LINC00641-201ENST00000555379 ZNF480Q8WV37 535 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 TMEM239Q8WW34 195 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 IL17FQ96PD4 163 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 ELF4Q99607 663 aaPredicted RBP7.88□□□□□ -1.15
LINC00641-201ENST00000555379 FUZQ9BT04 418 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 KCNK12Q9HB15 430 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 C19orf12Q9NSK7 152 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 FBXO4Q9UKT5 387 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 PCDHB10Q9UN67 800 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 CACNA1SQ13698 1873 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 CDHR4A6H8M9 788 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 H0YGG7 62 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 FABP1P07148 127 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 POU2F1P14859 743 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 ZNF182P17025 639 aaPredicted RBP7.88□□□□□ -1.15
LINC00641-201ENST00000555379 HMGA1P17096 107 aaKnown RBP7.88□□□□□ -1.15
LINC00641-201ENST00000555379 APOBEC1P41238 236 aaKnown RBP7.88□□□□□ -1.15
LINC00641-201ENST00000555379 ECI1P42126 302 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 SLC6A11P48066 632 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 ADPRHP54922 357 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 PITX1P78337 314 aaPredicted RBP7.88□□□□□ -1.15
LINC00641-201ENST00000555379 PRKCDQ05655 676 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 PXDC1Q5TGL8 231 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 METRNLQ641Q3 311 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 FAM111BQ6SJ93 734 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 TAS1R1Q7RTX1 841 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 SPRED1Q7Z699 444 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 FAM160A2Q8N612 972 aaPredicted RBP7.88□□□□□ -1.15
LINC00641-201ENST00000555379 DNAAF1Q8NEP3 725 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 GPR148Q8TDV2 347 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 RNF128Q8TEB7 428 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 SLAMF9Q96A28 289 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 INSM2Q96T92 566 aaPredicted RBP7.88□□□□□ -1.15
LINC00641-201ENST00000555379 RNF6Q9Y252 685 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 POMT1Q9Y6A1 747 aa7.88□□□□□ -1.15
LINC00641-201ENST00000555379 SIPA1L3O60292 1781 aaPredicted RBP7.87□□□□□ -1.15
LINC00641-201ENST00000555379 TRAV36DV7A0A075B6V5 113 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 DENRO43583 198 aaKnown RBP7.87□□□□□ -1.15
LINC00641-201ENST00000555379 DDAH2O95865 285 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 CDNFQ49AH0 187 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 ZNF529Q6P280 563 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 PET117Q6UWS5 81 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 RFPL4BQ6ZWI9 263 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 LAS2Q8IYD9 372 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 LRRC56Q8IYG6 542 aaPredicted RBP7.87□□□□□ -1.15
LINC00641-201ENST00000555379 CMTM1Q8IZ96 169 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 SNX18Q96RF0 628 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 HIPK2Q9H2X6 1198 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 DUSP22Q9NRW4 184 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 CNIH4Q9P003 139 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 TVP23AA6NH52 213 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 METTL12A8MUP2 240 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 TPST2O60704 377 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 HTR3BO95264 441 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 ZNF252P-AS1Q0IIN9 211 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 RAB40BQ12829 278 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 FAM53BQ14153 422 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 SIX1Q15475 284 aaPredicted RBP7.87□□□□□ -1.15
LINC00641-201ENST00000555379 SLC35D3Q5M8T2 416 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 HENMT1Q5T8I9 393 aaKnown RBP7.87□□□□□ -1.15
LINC00641-201ENST00000555379 AGAP7PQ5VUJ5 663 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 UGT2A3Q6UWM9 527 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 Q6ZNX1 250 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 OR4N5Q8IXE1 308 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 TCEANCQ8N8B7 351 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 ZNF649Q9BS31 505 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 C14orf119Q9NWQ9 140 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 PPT2Q9UMR5 302 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 A0A0A6YYC8 382 aaPredicted RBP7.87□□□□□ -1.15
LINC00641-201ENST00000555379 I3L1I5 382 aaPredicted RBP7.87□□□□□ -1.15
LINC00641-201ENST00000555379 RGS11O94810 467 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 IFNA2P01563 188 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 IFNA5P01569 189 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 UBBP0CG47 229 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 UBCP0CG48 685 aaKnown RBP7.87□□□□□ -1.15
LINC00641-201ENST00000555379 G0S2P27469 103 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 ACVR1BP36896 505 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 MAN2A2P49641 1150 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 ERVPABLB-1P60509 514 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 ACVR1Q04771 509 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 ILKQ13418 452 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 DYRK1AQ13627 763 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 IL11RAQ14626 422 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 MICAQ29983 383 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 LBHQ53QV2 105 aaPredicted RBP7.87□□□□□ -1.15
LINC00641-201ENST00000555379 TTC9BQ8N6N2 239 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 MFSD8Q8NHS3 518 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 RBM14Q96PK6 669 aaKnown RBP7.87□□□□□ -1.15
LINC00641-201ENST00000555379 WDR83Q9BRX9 315 aaKnown RBP7.87□□□□□ -1.15
LINC00641-201ENST00000555379 JAM3Q9BX67 310 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 MS4A8Q9BY19 250 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 ZNF160Q9HCG1 818 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 MAN2C1Q9NTJ4 1040 aa7.87□□□□□ -1.15
LINC00641-201ENST00000555379 B3GNT2Q9NY97 397 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms