RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 C3orf49Q96BT1 292 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 NPAS1Q99742 590 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 CTPS2Q9NRF8 586 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 CHRNA9Q9UGM1 479 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 OSGIN1Q9UJX0 560 aa12.9□□□□□ -0.34
CHD8-208ENST00000555301 TMED7-TICAM2A0A0A6YYA0 188 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 A0A0B4J2E0 115 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 A0A1B0GWA3 101 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 A0A1B0GX12 115 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 TCRBV5S2A0A599 114 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 CPSF4LA6NMK7 179 aaKnown RBP12.89□□□□□ -0.35
CHD8-208ENST00000555301 PRRG2O14669 202 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 ZNF208O43345 1280 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 SLC19A2O60779 497 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 PNMTP11086 282 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 CPN1P15169 458 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 ITGA2P17301 1181 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 HOXB6P17509 224 aaKnown RBP12.89□□□□□ -0.35
CHD8-208ENST00000555301 CXCR1P25024 350 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 LHX2P50458 406 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 ALG10BQ5I7T1 473 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 POMZP3Q6PJE2 187 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 FGD2Q7Z6J4 655 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 CYP4Z1Q86W10 505 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 ADGRG3Q86Y34 549 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 LILRA2Q8N149 483 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 MEIOBQ8N635 442 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 FAM86B1Q8N7N1 296 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 FAM57AQ8TBR7 257 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 ADAMTS16Q8TE57 1224 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 PHF10Q8WUB8 498 aaKnown RBP12.89□□□□□ -0.35
CHD8-208ENST00000555301 SLC47A1Q96FL8 570 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 RAB3IPQ96QF0 476 aaPredicted RBP12.89□□□□□ -0.35
CHD8-208ENST00000555301 PRR14Q9BWN1 585 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 AMBRA1Q9C0C7 1298 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 PRDM14Q9GZV8 571 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 MAGIXQ9H6Y5 334 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 ZNF835Q9Y2P0 537 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 TMED7Q9Y3B3 224 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 V9GYQ6 96 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 ZFYVE26Q68DK2 2539 aa12.89□□□□□ -0.35
CHD8-208ENST00000555301 TRAPPC13A5PLN9 417 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 ELOA3DA6NLF2 546 aaPredicted RBP12.88□□□□□ -0.35
CHD8-208ENST00000555301 OR5F1O95221 314 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 TPOP07202 933 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 THRBP10828 461 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 UMPSP11172 480 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 ZNF708P17019 499 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 IL11P20809 199 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 STARP49675 285 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 CLK1P49759 484 aaKnown RBP12.88□□□□□ -0.35
CHD8-208ENST00000555301 CASP6P55212 293 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 TAS2R41P59536 307 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 SF3B4Q15427 424 aaKnown RBP eCLIP12.88□□□□□ -0.35
CHD8-208ENST00000555301 ELOA3BQ3SY89 546 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 FAM98BQ52LJ0 330 aaKnown RBP12.88□□□□□ -0.35
CHD8-208ENST00000555301 DCST1Q5T197 706 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 PDSS1Q5T2R2 415 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 C1orf146Q5VVC0 180 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 Q6ZPB1 254 aaPredicted RBP12.88□□□□□ -0.35
CHD8-208ENST00000555301 ESPNLQ6ZVH7 1005 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 ZNF605Q86T29 641 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 ATG4DQ86TL0 474 aaPredicted RBP12.88□□□□□ -0.35
CHD8-208ENST00000555301 SPATA24Q86W54 205 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 ELOA3Q8NG57 546 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 SMPDL3BQ92485 455 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 SLC38A4Q969I6 547 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 UTP4Q969X6 686 aaKnown RBP12.88□□□□□ -0.35
CHD8-208ENST00000555301 WDYHV1Q96HA8 205 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 PRRC1Q96M27 445 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 IL1RAPQ9NPH3 570 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 TNFRSF10DQ9UBN6 386 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 FAM32AQ9Y421 112 aaKnown RBP12.88□□□□□ -0.35
CHD8-208ENST00000555301 ENPP4Q9Y6X5 453 aa12.88□□□□□ -0.35
CHD8-208ENST00000555301 FIGNL2A6NMB9 653 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 SEC14L5O43304 696 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 CHP2O43745 196 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 EFNA2O43921 213 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 WDR1O75083 606 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 WISP1O95388 367 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 SEMG1P04279 462 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 FABP3P05413 133 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 GPIP06744 558 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 GABRA1P14867 456 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 SLC7A1P30825 629 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 PTGER4P35408 488 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 CDH12P55289 794 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 CLDN18P56856 261 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 RPS3AP61247 264 aaKnown RBP12.87□□□□□ -0.35
CHD8-208ENST00000555301 CHRNB3Q05901 458 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 ST3GAL3Q11203 375 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 PIN1Q13526 163 aaPredicted RBP12.87□□□□□ -0.35
CHD8-208ENST00000555301 GXYLT1Q4G148 440 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 SYT14P1Q58G82 188 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 CHMP1BQ7LBR1 199 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 UBQLNLQ8IYU4 475 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 ATP6V1C2Q8NEY4 427 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 RNF217Q8TC41 542 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 DDIT4LQ96D03 193 aa12.87□□□□□ -0.35
CHD8-208ENST00000555301 SLC41A3Q96GZ6 507 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms