RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 BEND3Q5T5X7 828 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 MLIPQ5VWP3 458 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 PDPK2PQ6A1A2 396 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 SLC25A25Q6KCM7 469 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 PRR5LQ6MZQ0 368 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 PWWP2BQ6NUJ5 590 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 TPRA1Q86W33 373 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 CCDC50Q8IVM0 306 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 FAM9CQ8IZT9 166 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 SYCE1Q8N0S2 351 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 ZNF614Q8N883 585 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 OR1K1Q8NGR3 316 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 MAGEE2Q8TD90 523 aaPredicted RBP4.34□□□□□ -1.71
VRK1-203ENST00000555067 DTX3LQ8TDB6 740 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 ASZ1Q8WWH4 475 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 RAB1CQ92928 201 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 NTNG2Q96CW9 530 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 MBOAT4Q96T53 435 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 ROGDIQ9GZN7 287 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 SPACA1Q9HBV2 294 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 TREM1Q9NP99 234 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 RASD1Q9Y272 281 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 METP08581 1390 aa4.34□□□□□ -1.71
VRK1-203ENST00000555067 NEURL4Q96JN8 1562 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 A0A087WW49 117 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 BCKDKO14874 412 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 CLOCKO15516 846 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 CHMP2AO43633 222 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 JCHAINP01591 159 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 IGHG3P01860 377 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 P04436 131 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 RPLP0P05388 317 aaKnown RBP4.33□□□□□ -1.72
VRK1-203ENST00000555067 GNA11P29992 359 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 RPS27AP62979 156 aaKnown RBP4.33□□□□□ -1.72
VRK1-203ENST00000555067 CDK16Q00536 496 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 ZFP36L1Q07352 338 aaKnown RBP4.33□□□□□ -1.72
VRK1-203ENST00000555067 RAB35Q15286 201 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 SGSM1Q2NKQ1 1148 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 CYBRD1Q53TN4 286 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 WSCD1Q658N2 575 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 ADAMTSL5Q6ZMM2 481 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 TSEN54Q7Z6J9 526 aaKnown RBP4.33□□□□□ -1.72
VRK1-203ENST00000555067 MARVELD2Q8N4S9 558 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 ZNF596Q8TC21 504 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 GATAD1Q8WUU5 269 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 SDSLQ96GA7 329 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 IL22Q9GZX6 179 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 OR2AG1Q9H205 316 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 POPDC2Q9HBU9 364 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 PXMP2Q9NR77 195 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 UBAP1Q9NZ09 502 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 EIF3KQ9UBQ5 218 aaKnown RBP4.33□□□□□ -1.72
VRK1-203ENST00000555067 C15orf41Q9Y2V0 281 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 GMPPBQ9Y5P6 360 aa4.33□□□□□ -1.72
VRK1-203ENST00000555067 IGKV6D-41A0A0C4DH26 115 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 A0A1B0GUH1 482 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 MSGN1A6NI15 193 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 ZNF724A8MTY0 619 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 ZNF195O14628 629 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 POLR1CO15160 346 aaPredicted RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 SURF4O15260 269 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 TRMUO75648 421 aaKnown RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 PDE5AO76074 875 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 AP2A2O94973 939 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 EDN1P05305 212 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 SERPIND1P05546 499 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 GCAP28676 217 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 GTF2E2P29084 291 aaKnown RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 GPR183P32249 361 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 RPL4P36578 427 aaKnown RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 GPR4P46093 362 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 UQCRFS1P47985 274 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 POU3F4P49335 361 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 STK19P49842 368 aaPredicted RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 CSRP3P50461 194 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 YWHAGP61981 247 aaKnown RBP eCLIP4.32□□□□□ -1.72
VRK1-203ENST00000555067 EIF2B1Q14232 305 aaKnown RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 CD226Q15762 336 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 GLYR1Q49A26 553 aaPredicted RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 BEX5Q5H9J7 111 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 TWF2Q6IBS0 349 aaKnown RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 ENPP6Q6UWR7 440 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 UTS2BQ765I0 119 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 APTXQ7Z2E3 356 aaKnown RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 SLC35F2Q8IXU6 374 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 ZSCAN4Q8NAM6 433 aaPredicted RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 OR9Q2Q8NGE9 314 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 OR6F1Q8NGZ6 308 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 OR2T11Q8NH01 316 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 AENQ8WTP8 325 aaKnown RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 ZNRF4Q8WWF5 429 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 UBE2E3Q969T4 207 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 DNAJA3Q96EY1 480 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 CERS2Q96G23 380 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 ZNF578Q96N58 590 aaPredicted RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 ILKAPQ9H0C8 392 aaPredicted RBP4.32□□□□□ -1.72
VRK1-203ENST00000555067 NMRAL1Q9HBL8 299 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 CCNB1IP1Q9NPC3 277 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 INPP5EQ9NRR6 644 aa4.32□□□□□ -1.72
VRK1-203ENST00000555067 PLCXD1Q9NUJ7 323 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms