RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 TMEM43Q9BTV4 400 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 PHF7Q9BWX1 381 aaPredicted RBP13.7□□□□□ -0.22
XRCC3-211ENST00000555055 SPRTNQ9H040 489 aaPredicted RBP13.7□□□□□ -0.22
XRCC3-211ENST00000555055 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.7□□□□□ -0.228e-6■■■■□ 20.1
XRCC3-211ENST00000555055 NTMQ9P121 344 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 GSTK1Q9Y2Q3 226 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 SF3B6Q9Y3B4 125 aaKnown RBP13.7□□□□□ -0.22
XRCC3-211ENST00000555055 A8MUA0 341 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 C10orf142B7Z368 130 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 SLC30A4O14863 429 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 ZGLP1P0C6A0 271 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 ARSBP15848 533 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 HK1P19367 917 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 FZD5Q13467 585 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 ZBTB37Q5TC79 503 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 CD300LDQ6UXZ3 194 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 LAPTM4BQ86VI4 370 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 PRSS58Q8IYP2 241 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 Q8N402 240 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 LSMEM1Q8N8F7 131 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 OR51A7Q8NH64 312 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.7□□□□□ -0.22
XRCC3-211ENST00000555055 AKAP1Q92667 903 aaKnown RBP eCLIP13.7□□□□□ -0.22
XRCC3-211ENST00000555055 DNAJA3Q96EY1 480 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 MAP6Q96JE9 813 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 GPR137Q96N19 417 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 HCAR1Q9BXC0 346 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 FOLH1BQ9HBA9 442 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 SPIN1Q9Y657 262 aaPredicted RBP13.7□□□□□ -0.22
XRCC3-211ENST00000555055 ARID1BQ8NFD5 2236 aaPredicted RBP13.69□□□□□ -0.22
XRCC3-211ENST00000555055 FAM240BA0A1B0GVZ2 78 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 LRRN3E7EW58 273 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 PLOD3O60568 738 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 LALBAP00709 142 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 CLEC2LP0C7M8 214 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 PSKH1P11801 424 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 IFI30P13284 250 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 CD38P28907 300 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 GCGRP47871 477 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 GAS1P54826 345 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 WNT4P56705 351 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 EFNB1P98172 346 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 ZNF791Q3KP31 576 aaPredicted RBP13.69□□□□□ -0.22
XRCC3-211ENST00000555055 AMZ1Q400G9 498 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 GXYLT1Q4G148 440 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 KLHL22Q53GT1 634 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 PRAMEF8Q5VWM4 474 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 PRAMEF7Q5VXH5 474 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 BICRALQ6AI39 1079 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 C22orf42Q6IC83 251 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 C9orf62Q8N4C0 152 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 CDRT4Q8N9R6 151 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 POGLUT1Q8NBL1 392 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 OR13C2Q8NGS9 318 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 LRRN3Q9H3W5 708 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 CACYBPQ9HB71 228 aaKnown RBP13.69□□□□□ -0.22
XRCC3-211ENST00000555055 FGF20Q9NP95 211 aaPredicted RBP13.69□□□□□ -0.22
XRCC3-211ENST00000555055 GPR27Q9NS67 375 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 NLGN3Q9NZ94 848 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 ELF5Q9UKW6 265 aaPredicted RBP13.69□□□□□ -0.22
XRCC3-211ENST00000555055 CDHR4A6H8M9 788 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 OR5K4A6NMS3 321 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 PROS1P07225 676 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 NID1P14543 1247 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 IL9P15248 144 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 PRKACBP22694 351 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 GABRA5P31644 462 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 CAV3P56539 151 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 RAB38P57729 211 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 POU6F2P78424 691 aaPredicted RBP13.69□□□□□ -0.22
XRCC3-211ENST00000555055 MRPL28Q13084 256 aaKnown RBP13.69□□□□□ -0.22
XRCC3-211ENST00000555055 COL19A1Q14993 1142 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 NDUFA9Q16795 377 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 THSD4Q6ZMP0 1018 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 ARHGEF39Q8N4T4 335 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 ZNF321PQ8N8H1 164 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 RIT1Q92963 219 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 UPRTQ96BW1 309 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 RBM18Q96H35 190 aaKnown RBP13.69□□□□□ -0.22
XRCC3-211ENST00000555055 TTTY10Q9BZA0 68 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 TEKT2Q9UIF3 430 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 ADAM30Q9UKF2 790 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 ERVK-19Q9WJR5 959 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 SPEF1Q9Y4P9 236 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 HSPB11Q9Y547 144 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 CLCA3PQ9Y6N3 262 aa13.69□□□□□ -0.22
XRCC3-211ENST00000555055 IGLV3-19P01714 112 aa13.68□□□□□ -0.22
XRCC3-211ENST00000555055 IFNA16P05015 189 aa13.68□□□□□ -0.22
XRCC3-211ENST00000555055 CLUP10909 449 aa13.68□□□□□ -0.22
XRCC3-211ENST00000555055 S1PR1P21453 382 aa13.68□□□□□ -0.22
XRCC3-211ENST00000555055 OR1D4P47884 311 aa13.68□□□□□ -0.22
XRCC3-211ENST00000555055 MTNR1AP48039 350 aa13.68□□□□□ -0.22
XRCC3-211ENST00000555055 EVX1P49640 407 aa13.68□□□□□ -0.22
XRCC3-211ENST00000555055 CDH11P55287 796 aa13.68□□□□□ -0.22
XRCC3-211ENST00000555055 DSG2Q14126 1118 aa13.68□□□□□ -0.22
XRCC3-211ENST00000555055 COL13A1Q5TAT6 717 aaPredicted RBP13.68□□□□□ -0.22
XRCC3-211ENST00000555055 PLBD1Q6P4A8 553 aa13.68□□□□□ -0.22
XRCC3-211ENST00000555055 ZNF620Q6ZNG0 422 aa13.68□□□□□ -0.22
XRCC3-211ENST00000555055 RASSF6Q6ZTQ3 369 aa13.68□□□□□ -0.22
XRCC3-211ENST00000555055 MBOAT2Q6ZWT7 520 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms