RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 EPS8Q12929 822 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 SELENBP1Q13228 472 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 NDUFAF6Q330K2 333 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 TMEM176BQ3YBM2 270 aaPredicted RBP9.55□□□□□ -0.88
TMEM260-206ENST00000555046 ACSF3Q4G176 576 aaPredicted RBP9.55□□□□□ -0.88
TMEM260-206ENST00000555046 RABL3Q5HYI8 236 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 RPS26P11Q5JNZ5 115 aaPredicted RBP9.55□□□□□ -0.88
TMEM260-206ENST00000555046 WBP2NLQ6ICG8 309 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 C3orf33Q6P1S2 294 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 C16orf89Q6UX73 402 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 C3P1Q6ZMU1 363 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 ZNF836Q6ZNA1 936 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 CCDC80Q76M96 950 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 OLIG3Q7RTU3 272 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 P4HA3Q7Z4N8 544 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 VRK2Q86Y07 508 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 PTOV1Q86YD1 416 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 TREML1Q86YW5 311 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 SLC15A3Q8IY34 581 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 ZZZ3Q8IYH5 903 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 CLIP4Q8N3C7 705 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 OR2T12Q8NG77 320 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 DNAJA4Q8WW22 397 aaPredicted RBP9.55□□□□□ -0.88
TMEM260-206ENST00000555046 LZICQ8WZA0 190 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 CNOT9Q92600 299 aaKnown RBP9.55□□□□□ -0.88
TMEM260-206ENST00000555046 ZNF583Q96ND8 569 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 GPATCH1Q9BRR8 931 aaKnown RBP9.55□□□□□ -0.88
TMEM260-206ENST00000555046 SLC39A3Q9BRY0 314 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 REPIN1Q9BWE0 567 aaKnown RBP9.55□□□□□ -0.88
TMEM260-206ENST00000555046 PRRG4Q9BZD6 226 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 TRIM2Q9C040 744 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 TMEM27Q9HBJ8 222 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 GLRX2Q9NS18 164 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 RLIMQ9NVW2 624 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 DNAJB12Q9NXW2 375 aaKnown RBP9.55□□□□□ -0.88
TMEM260-206ENST00000555046 RPS6KB2Q9UBS0 482 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 ZNF629Q9UEG4 869 aaPredicted RBP9.55□□□□□ -0.88
TMEM260-206ENST00000555046 BAG5Q9UL15 447 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 ZNF175Q9Y473 711 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 HRH3Q9Y5N1 445 aa9.55□□□□□ -0.88
TMEM260-206ENST00000555046 FBN1P35555 2871 aaKnown RBP9.54□□□□□ -0.88
TMEM260-206ENST00000555046 CENPVL1A0A0U1RR11 272 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 MBD3L4A6NDZ8 208 aaPredicted RBP9.54□□□□□ -0.88
TMEM260-206ENST00000555046 MBD3L3A6NE82 208 aaPredicted RBP9.54□□□□□ -0.88
TMEM260-206ENST00000555046 MBD3L5A6NJ08 208 aaPredicted RBP9.54□□□□□ -0.88
TMEM260-206ENST00000555046 SLC22A20A6NK97 555 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 CLDN24A6NM45 220 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 CLCA1A8K7I4 914 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 C17orf51A8MQB3 221 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 FAM220BPB1ANY3 271 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 B4DXG7 233 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 SYT5O00445 386 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 EIF1AYO14602 144 aaKnown RBP9.54□□□□□ -0.88
TMEM260-206ENST00000555046 DVL2O14641 736 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 ZNF208O43345 1280 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 OIP5O43482 229 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 ZG16O60844 167 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 RCBTB2O95199 551 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 NTN1O95631 604 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 IL18BPO95998 194 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 CRHP06850 196 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 CXCR1P25024 350 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 PSMA4P25789 261 aaKnown RBP9.54□□□□□ -0.88
TMEM260-206ENST00000555046 IFNA8P32881 189 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 EIF1AXP47813 144 aaKnown RBP9.54□□□□□ -0.88
TMEM260-206ENST00000555046 GZMMP51124 257 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 CLDN15P56746 228 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 PCBP3P57721 371 aaKnown RBP9.54□□□□□ -0.88
TMEM260-206ENST00000555046 PSME3P61289 254 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 NCALDP61601 193 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 CSNK2A1P68400 391 aaPredicted RBP9.54□□□□□ -0.88
TMEM260-206ENST00000555046 MXRA7P84157 204 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 FOXF1Q12946 379 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 SELPLGQ14242 412 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 TOMM34Q15785 309 aaPredicted RBP9.54□□□□□ -0.88
TMEM260-206ENST00000555046 HBMQ6B0K9 141 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 RTL6Q6ICC9 239 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 PLEKHM3Q6ZWE6 761 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 RANBP3LQ86VV4 465 aaPredicted RBP9.54□□□□□ -0.88
TMEM260-206ENST00000555046 CALHM3Q86XJ0 350 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 ZGRF1Q86YA3 2104 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 UBQLNLQ8IYU4 475 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 OR5M1Q8NGP8 315 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 LILRB4Q8NHJ6 448 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 MBD3L2Q8NHZ7 208 aaPredicted RBP9.54□□□□□ -0.88
TMEM260-206ENST00000555046 SMPDL3BQ92485 455 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 PROX1Q92786 737 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 OSTF1Q92882 214 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 CPNE4Q96A23 557 aaPredicted RBP9.54□□□□□ -0.88
TMEM260-206ENST00000555046 SDCCAG3Q96C92 435 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 DDIT4LQ96D03 193 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 KLHL15Q96M94 604 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 TUBA1CQ9BQE3 449 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 ZNF559Q9BR84 538 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 PIF1Q9H611 641 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 CHST11Q9NPF2 352 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 CHRNA9Q9UGM1 479 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 SLC9A8Q9Y2E8 581 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 HDGFL3Q9Y3E1 203 aa9.54□□□□□ -0.88
TMEM260-206ENST00000555046 KLF2Q9Y5W3 355 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms