RNA–Protein interactions for RNA: ENST00000554843.5

PSMA6-208, Transcript of proteasome subunit alpha 6, human

TSL 2

Gene PSMA6, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMA6-208	ENST00000554843	SNRNP40	Q96DI7	357 aa	Known RBP	13.42	□□□□□ -0.26
PSMA6-208	ENST00000554843	SLC41A3	Q96GZ6	507 aa		13.42	□□□□□ -0.26
PSMA6-208	ENST00000554843	DHRS1	Q96LJ7	313 aa		13.42	□□□□□ -0.26
PSMA6-208	ENST00000554843	PRR14	Q9BWN1	585 aa		13.42	□□□□□ -0.26
PSMA6-208	ENST00000554843	CHID1	Q9BWS9	393 aa		13.42	□□□□□ -0.26
PSMA6-208	ENST00000554843	SLC6A15	Q9H2J7	730 aa		13.42	□□□□□ -0.26
PSMA6-208	ENST00000554843	YY1AP1	Q9H869	796 aa		13.42	□□□□□ -0.26
PSMA6-208	ENST00000554843	CTPS2	Q9NRF8	586 aa		13.42	□□□□□ -0.26
PSMA6-208	ENST00000554843	AGPAT4	Q9NRZ5	378 aa		13.42	□□□□□ -0.26
PSMA6-208	ENST00000554843	ARMC1	Q9NVT9	282 aa		13.42	□□□□□ -0.26
PSMA6-208	ENST00000554843	OSGIN1	Q9UJX0	560 aa		13.42	□□□□□ -0.26
PSMA6-208	ENST00000554843	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMA6-208	ENST00000554843	FAM32A	Q9Y421	112 aa	Known RBP	13.42	□□□□□ -0.26
PSMA6-208	ENST00000554843	TRGV5	A0A0B4J1U4	118 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	NPIPA5	E9PKD4	350 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	AQP7	O14520	342 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	FFAR1	O14842	300 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	SUSD5	O60279	629 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	LYPD3	O95274	346 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	ACTL6A	O96019	429 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	THY1	P04216	161 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	PNMT	P11086	282 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	TCEA1	P23193	301 aa	Known RBP	13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	TDGF1P3	P51864	188 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	ST3GAL3	Q11203	375 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	MERTK	Q12866	999 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	PIN1	Q13526	163 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	PRR30	Q53SZ7	412 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	C3orf33	Q6P1S2	294 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	ZFP1	Q6P2D0	407 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	AAGAB	Q6PD74	315 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	MPP4	Q96JB8	637 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	NPAS1	Q99742	590 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	PIP5K1A	Q99755	562 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	DEFB127	Q9H1M4	99 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	ANKRD19P	Q9H560	264 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	SELENON	Q9NZV5	590 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	CHRNA9	Q9UGM1	479 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	NPIPA1	Q9UND3	350 aa		13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	SPIN1	Q9Y657	262 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMA6-208	ENST00000554843	ZFYVE26	Q68DK2	2539 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	MED12	Q93074	2177 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843		A0A087WUJ7	227 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	TMED7-TICAM2	A0A0A6YYA0	188 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	TTLL8	A6PVC2	850 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	SHISA8	B8ZZ34	492 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843		J3KTA2	159 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	ADAMDEC1	O15204	470 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	ZNF208	O43345	1280 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	FCGR1A	P12314	374 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	FKBP2	P26885	142 aa	Known RBP	13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	CDH12	P55289	794 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	FOXK1	P85037	733 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	GK3P	Q14409	553 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	KRTCAP3	Q53RY4	240 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	COLEC12	Q5KU26	742 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	ARHGAP11A	Q6P4F7	1023 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	GDF7	Q7Z4P5	450 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	ADGRG3	Q86Y34	549 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	GHDC	Q8N2G8	530 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	SLC38A4	Q969I6	547 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	BBC3	Q96PG8	261 aa	Predicted RBP	13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	PRSS27	Q9BQR3	290 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	ZNF426	Q9BUY5	554 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	FNDC11	Q9BVV2	318 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	LDAH	Q9H6V9	325 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	SERINC1	Q9NRX5	453 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	MAN2C1	Q9NTJ4	1040 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	ASF1B	Q9NVP2	202 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	SPRR3	Q9UBC9	169 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	RIMS3	Q9UJD0	308 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	SLC6A5	Q9Y345	797 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	TMED7	Q9Y3B3	224 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843	SVIL	O95425	2214 aa		13.4	□□□□□ -0.26
PSMA6-208	ENST00000554843		A0A1W2PRQ8	180 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	OR14I1	A6ND48	311 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	ENTPD5	O75356	428 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	DIRAS1	O95057	198 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	WISP1	O95388	367 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	MT-ND1	P03886	318 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	H1F0	P07305	194 aa	Known RBP	13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	PEPD	P12955	493 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	CXCR1	P25024	350 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	RBM34	P42696	430 aa	Known RBP	13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	YAP1	P46937	504 aa	Known RBP	13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	SMIM11A	P58511	58 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	RAC1	P63000	192 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	SPIB	Q01892	262 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	CRYZ	Q08257	329 aa	Known RBP	13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	DGCR6	Q14129	220 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	TRAM2	Q15035	370 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	ELOA3B	Q3SY89	546 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	OR2T5	Q6IEZ7	315 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	C5orf46	Q6UWT4	87 aa		13.39	□□□□□ -0.27
PSMA6-208	ENST00000554843	ELOA3	Q8NG57	546 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms