RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ATP1B3P54709 279 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 SEC61GP60059 68 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 CSTF1Q05048 431 aaKnown RBP2.29□□□□□ -2.04
SCFD1-213ENST00000554776 VGLL4Q14135 290 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 GANABQ14697 944 aaKnown RBP2.29□□□□□ -2.04
SCFD1-213ENST00000554776 SLC15A2Q16348 729 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 KCTD21Q4G0X4 260 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 SBK1Q52WX2 424 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 BOLA3Q53S33 107 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 PAGE2BQ5JRK9 111 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 ZNF658Q5TYW1 1059 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-213ENST00000554776 OR5M10Q6IEU7 315 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 CCDC137Q6PK04 289 aaKnown RBP2.29□□□□□ -2.04
SCFD1-213ENST00000554776 FRA10AC1Q70Z53 315 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 DHDDSQ86SQ9 333 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 NRMQ8IXM6 262 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 CCDC65Q8IXS2 484 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 MFSD9Q8NBP5 474 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 OR10H4Q8NGA5 316 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 OR13F1Q8NGS4 319 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 OR56B4Q8NH76 319 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 MRAPQ8TCY5 172 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 SCFD1Q8WVM8 642 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 FBXO32Q969P5 355 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 SLC41A3Q96GZ6 507 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 TCEANC2Q96MN5 208 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 RPRD1AQ96P16 312 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-213ENST00000554776 RBM14Q96PK6 669 aaKnown RBP2.29□□□□□ -2.04
SCFD1-213ENST00000554776 NAT10Q9H0A0 1025 aaKnown RBP2.29□□□□□ -2.04
SCFD1-213ENST00000554776 NANSQ9NR45 359 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 B3GNT2Q9NY97 397 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 COX16Q9P0S2 106 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 ONECUT1Q9UBC0 465 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 CLEC4EQ9ULY5 219 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 MOKQ9UQ07 419 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 VSIG4Q9Y279 399 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 PLLPQ9Y342 182 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 FLVCR1Q9Y5Y0 555 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 CHD4Q14839 1912 aa2.29□□□□□ -2.04
SCFD1-213ENST00000554776 RPAP1Q9BWH6 1393 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-213ENST00000554776 A0A0G2JRQ6 117 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 KLF18A0A0U1RQI7 1052 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 A0A1B0GWB2 263 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 FAM168BA1KXE4 195 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 ARHGEF35A5YM69 484 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 K7N7A8 449 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 WWP2O00308 870 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 NBR2O15453 112 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 POLR2DO15514 142 aaKnown RBP2.28□□□□□ -2.04
SCFD1-213ENST00000554776 TIMM8AO60220 97 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-213ENST00000554776 HCN1O60741 890 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 PFKFB2O60825 505 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 UGT2B17O75795 530 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 CABYRO75952 493 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 IGKV3-15P01624 115 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 CAPN1P07384 714 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 ZNF853P0CG23 659 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 HSMCR30P0CW71 290 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 CCDC130P13994 396 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 POU2F1P14859 743 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 IGLL1P15814 213 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 KLK2P20151 261 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 AQP1P29972 269 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 GNA11P29992 359 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 GSSP48637 474 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 TDO2P48775 406 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 CCT3P49368 545 aaKnown RBP2.28□□□□□ -2.04
SCFD1-213ENST00000554776 DAP3P51398 398 aaKnown RBP2.28□□□□□ -2.04
SCFD1-213ENST00000554776 SLC10A7Q0GE19 358 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 AANATQ16613 207 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 SFT2D3Q587I9 215 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 PHYHD1Q5SRE7 291 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 OR2A2Q6IF42 318 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 Q6ZPB1 254 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-213ENST00000554776 ZNF584Q8IVC4 421 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 CEND1Q8N111 149 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 GPR137CQ8N3F9 429 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 ZNF525Q8N782 197 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 OR13C2Q8NGS9 318 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 FGF11Q92914 225 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 COQ2Q96H96 371 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 KLHDC3Q9BQ90 382 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 NIPSNAP3BQ9BS92 247 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 ROPN1BQ9BZX4 212 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-213ENST00000554776 Q9H3A6 140 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 C6orf203Q9P0P8 240 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-213ENST00000554776 PHF11Q9UIL8 331 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 KLHL21Q9UJP4 597 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 ADAM28Q9UKQ2 775 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 RASD1Q9Y272 281 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 LRRK1Q38SD2 2015 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 FRMPD3Q5JV73 1810 aa2.28□□□□□ -2.04
SCFD1-213ENST00000554776 HELTA6NFD8 242 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 B4DXG7 233 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 E7ESA3 106 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 UBXN8O00124 270 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 ZNF264O43296 627 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 CXCL13O43927 109 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 FCMRO60667 390 aa2.27□□□□□ -2.05
SCFD1-213ENST00000554776 SCGNO76038 276 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms