RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 CLIC1O00299 241 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 EDF1O60869 148 aaKnown RBP6.72□□□□□ -1.33
LINC00640-201ENST00000554409 ADAM11O75078 769 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 BCAS1O75363 584 aaPredicted RBP6.72□□□□□ -1.33
LINC00640-201ENST00000554409 CYP7B1O75881 506 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 PLGP00747 810 aaPredicted RBP6.72□□□□□ -1.33
LINC00640-201ENST00000554409 TFPTP0C1Z6 253 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 NR2F1P10589 423 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 ETFAP13804 333 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 POU2F1P14859 743 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 FKBP2P26885 142 aaKnown RBP6.72□□□□□ -1.33
LINC00640-201ENST00000554409 AGTR1P30556 359 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 CCKARP32238 428 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 SFTPDP35247 375 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 CRATP43155 626 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 CRISP3P54108 245 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 CTBP2P56545 445 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 SESN3P58005 492 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 RAC3P60763 192 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 DSTNP60981 165 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 MERTKQ12866 999 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 GNA13Q14344 377 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 SQLEQ14534 574 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 RGNQ15493 299 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 TMEM176BQ3YBM2 270 aaPredicted RBP6.72□□□□□ -1.33
LINC00640-201ENST00000554409 GTDC1Q4AE62 458 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 C6orf10Q5SRN2 563 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 RNF220Q5VTB9 566 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 PRAMEF8Q5VWM4 474 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 PRAMEF7Q5VXH5 474 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 SLC2A7Q6PXP3 512 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 FCRLAQ7L513 359 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 GRINAQ7Z429 371 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 PEX5LQ8IYB4 626 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 ZNF440Q8IYI8 595 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 SLC43A2Q8N370 569 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 ARFGAP2Q8N6H7 521 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 ZNF610Q8N9Z0 462 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 LINC01560Q8TB33 94 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 SLC38A5Q8WUX1 472 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 WDR60Q8WVS4 1066 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 NINJ1Q92982 152 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 SPDL1Q96EA4 605 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 REXO5Q96IC2 774 aaKnown RBP6.72□□□□□ -1.33
LINC00640-201ENST00000554409 GPATCH1Q9BRR8 931 aaKnown RBP6.72□□□□□ -1.33
LINC00640-201ENST00000554409 TACO1Q9BSH4 297 aaKnown RBP6.72□□□□□ -1.33
LINC00640-201ENST00000554409 CCDC106Q9BWC9 280 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 QRSL1Q9H0R6 528 aaKnown RBP6.72□□□□□ -1.33
LINC00640-201ENST00000554409 OR10A4Q9H209 315 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 CLEC4MQ9H2X3 399 aaPredicted RBP6.72□□□□□ -1.33
LINC00640-201ENST00000554409 ZNF385DQ9H6B1 395 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 SERINC1Q9NRX5 453 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 KLHL13Q9P2N7 655 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 NDRG3Q9UGV2 375 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 PCDHB14Q9Y5E9 798 aa6.72□□□□□ -1.33
LINC00640-201ENST00000554409 SPIN1Q9Y657 262 aaPredicted RBP6.72□□□□□ -1.33
LINC00640-201ENST00000554409 LRBAP50851 2863 aa6.71□□□□□ -1.33
LINC00640-201ENST00000554409 DCHS2Q6V1P9 2916 aa6.71□□□□□ -1.33
LINC00640-201ENST00000554409 TRBV5-3A0A0A0MS03 114 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 A0A0G2JPF8 293 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 A0A1W2PNR3 127 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 SLC35F4A4IF30 521 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 CDHR4A6H8M9 788 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 TMEM247A6NEH6 219 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 CLDN24A6NM45 220 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 HNRNPCL2B2RXH8 293 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 HNRNPCL3B7ZW38 293 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 C16orf97H3BN30 126 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 SMAD9O15198 467 aaKnown RBP6.71□□□□□ -1.34
LINC00640-201ENST00000554409 HNRNPCL1O60812 293 aaKnown RBP6.71□□□□□ -1.34
LINC00640-201ENST00000554409 PRKD3O94806 890 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 PMS2P2O95744 297 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 BCHEP06276 602 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 THBS1P07996 1170 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 HNRNPCL4P0DMR1 293 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 IL7RP16871 459 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 PPIBP23284 216 aaKnown RBP6.71□□□□□ -1.34
LINC00640-201ENST00000554409 SLC7A1P30825 629 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 UGT2B10P36537 528 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 HTR3AP46098 478 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 CLK1P49759 484 aaKnown RBP6.71□□□□□ -1.34
LINC00640-201ENST00000554409 DIO1P49895 249 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 MAP2K6P52564 334 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 CSNK2A1P68400 391 aaPredicted RBP6.71□□□□□ -1.34
LINC00640-201ENST00000554409 FAM27E3Q08E93 113 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 EPS8Q12929 822 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 TESK1Q15569 626 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 ZSWIM7Q19AV6 140 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 LIN52Q52LA3 116 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 SYT14P1Q58G82 188 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 MRPL2Q5T653 305 aaKnown RBP6.71□□□□□ -1.34
LINC00640-201ENST00000554409 LCE2AQ5TA79 106 aaPredicted RBP6.71□□□□□ -1.34
LINC00640-201ENST00000554409 ABLIM2Q6H8Q1 611 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 PPP4R4Q6NUP7 873 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 ZNF836Q6ZNA1 936 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 BEND4Q6ZU67 534 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 HMGN2P46Q86SG4 172 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 CDC20BQ86Y33 519 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 ADGRG3Q86Y34 549 aa6.71□□□□□ -1.34
LINC00640-201ENST00000554409 MSRB3Q8IXL7 192 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms