RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CLOCKO15516 846 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 PSTPIP1O43586 416 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 CLDN9O95484 217 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 YEATS4O95619 227 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 DUS4LO95620 317 aaKnown RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 FGFR1OPO95684 399 aaKnown RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 APOA1P02647 267 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 GAPDHP04406 335 aaKnown RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 CRYGCP07315 174 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 CRYGBP07316 175 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 IVLP07476 585 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 HBQ1P09105 142 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 NPIPA8P0DM63 369 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 UMPSP11172 480 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 NEFHP12036 1026 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 CD1DP15813 335 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 XRCC1P18887 633 aaPredicted RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 TBXA2RP21731 343 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 MMP11P24347 488 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 EDNRAP25101 427 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 YWHABP31946 246 aaKnown RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 GPR183P32249 361 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 CDH5P33151 784 aaPredicted RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 RFX3P48380 749 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 HLCSP50747 726 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 RAB9AP51151 201 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 EFNB2P52799 333 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 PSMD4P55036 377 aaKnown RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 DAOAP59103 153 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 GSTO1P78417 241 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 IRF8Q02556 426 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 C1orf61Q13536 156 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 CRMP1Q14194 572 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 GK3PQ14409 553 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 FAM83EQ2M2I3 478 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 SGSM1Q2NKQ1 1148 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 KLHL38Q2WGJ6 581 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 VPS26BQ4G0F5 336 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 NKAIN1Q4KMZ8 207 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 LGSNQ5TDP6 509 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 OR8G2PQ6IF36 304 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 LEG1Q6P5S2 330 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 CCDC137Q6PK04 289 aaKnown RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 DEGS2Q6QHC5 323 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 ENPP6Q6UWR7 440 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 APOOLQ6UXV4 268 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 LRRC31Q6UY01 552 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 TMEM184AQ6ZMB5 413 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 HSD11B1LQ7Z5J1 315 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 GPR142Q7Z601 462 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 VRK2Q86Y07 508 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 KRTAP11-1Q8IUC1 163 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 RAB42Q8N4Z0 105 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 DHRSXQ8N5I4 330 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 GVQW1Q8N7I0 195 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 OR2T33Q8NG76 320 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 OR2L3Q8NG85 312 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 OR4C5Q8NGB2 326 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 OR5T3Q8NGG3 340 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 OR4D10Q8NGI6 311 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 OR4A15Q8NGL6 344 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 OR2T11Q8NH01 316 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 OR6S1Q8NH40 331 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 LKAAEAR1Q8TD35 194 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 CD300LFQ8TDQ1 290 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 TBCKQ8TEA7 893 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 CA5BP1Q8WTZ4 195 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 GLYATL2Q8WU03 294 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 SMAP2Q8WU79 429 aaPredicted RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 CCDC12Q8WUD4 166 aaPredicted RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 NRGNQ92686 78 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.88□□□□□ -2.11
SRP54-204ENST00000553923 CXorf40BQ96DE9 158 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 MSANTD3Q96H12 275 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 ZNF486Q96H40 463 aaPredicted RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 TNFRSF13CQ96RJ3 184 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 CPXM1Q96SM3 734 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 KCNS3Q9BQ31 491 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 TUBGCP2Q9BSJ2 902 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 TMEM121Q9BTD3 319 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 PAPOLGQ9BWT3 736 aaKnown RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 BBS2Q9BXC9 721 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 CLEC7AQ9BXN2 247 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 DUSP16Q9BY84 665 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 ANKRD60Q9BZ19 345 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 SLITRK2Q9H156 845 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 ELOVL6Q9H5J4 265 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 AZI2Q9H6S1 392 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 NMUR1Q9HB89 426 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 NMRAL1Q9HBL8 299 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 POPDC2Q9HBU9 364 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 ESM1Q9NQ30 184 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 DYRK4Q9NR20 520 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 NANSQ9NR45 359 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 STARD5Q9NSY2 213 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 IFNKQ9P0W0 207 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 SEC14L4Q9UDX3 406 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 PURGQ9UJV8 347 aaKnown RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 STAP1Q9ULZ2 295 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 NPIPA1Q9UND3 350 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms