RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 SORDQ00796 357 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 EPS8Q12929 822 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 MYBPHQ13203 477 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 RUNDC3AQ59EK9 446 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 BBS10Q8TAM1 723 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 RNF128Q8TEB7 428 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 ZNF317Q96PQ6 595 aaPredicted RBP18.22■□□□□ 0.51
FOXA1-203ENST00000553751 TIGARQ9NQ88 270 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 CTPS2Q9NRF8 586 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 CRIM1Q9NZV1 1036 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 KLHL14Q9P2G3 628 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 CLEC4AQ9UMR7 237 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 CORO2BQ9UQ03 480 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 CHST2Q9Y4C5 530 aa18.22■□□□□ 0.51
FOXA1-203ENST00000553751 A0A1W2PNR3 127 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 CFAP73A6NFT4 308 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 SMNDC1O75940 238 aaKnown RBP eCLIP18.21■□□□□ 0.51
FOXA1-203ENST00000553751 PGM3O95394 542 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 PABPC4LP0CB38 370 aaKnown RBP18.21■□□□□ 0.51
FOXA1-203ENST00000553751 CD8BP10966 210 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 SLC7A1P30825 629 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 CPOXP36551 454 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 KIR2DL3P43628 341 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 SYT14P1Q58G82 188 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 KIF18BQ86Y91 864 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 NFKBIDQ8NI38 313 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 SLC25A43Q8WUT9 341 aaPredicted RBP18.21■□□□□ 0.51
FOXA1-203ENST00000553751 ROBO4Q8WZ75 1007 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 CGREF1Q99674 301 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 ZNF559Q9BR84 538 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 OPN3Q9H1Y3 402 aaPredicted RBP18.21■□□□□ 0.51
FOXA1-203ENST00000553751 MCCC2Q9HCC0 563 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 SAR1AQ9NR31 198 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 SERINC1Q9NRX5 453 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 CHRNA9Q9UGM1 479 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 CSMD2Q7Z408 3487 aa18.21■□□□□ 0.51
FOXA1-203ENST00000553751 EVPLLA8MZ36 301 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 C5orf58C9J3I9 102 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 FBP2O00757 339 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 PLGP00747 810 aaPredicted RBP18.2■□□□□ 0.5
FOXA1-203ENST00000553751 GKN3PP0CG01 181 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 KRTAP10-9P60411 292 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 RAC3P60763 192 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 CDK6Q00534 326 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 SELPLGQ14242 412 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 LARS2Q15031 903 aaKnown RBP18.2■□□□□ 0.5
FOXA1-203ENST00000553751 ADRM1Q16186 407 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 ZNF474Q6S9Z5 364 aaPredicted RBP18.2■□□□□ 0.5
FOXA1-203ENST00000553751 LSRQ86X29 649 aaPredicted RBP18.2■□□□□ 0.5
FOXA1-203ENST00000553751 ZZZ3Q8IYH5 903 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 ZNF440Q8IYI8 595 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 CLIP4Q8N3C7 705 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 OR6K3Q8NGY3 331 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 ABHD3Q8WU67 409 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 LURAP1Q96LR2 239 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 ANKRD27Q96NW4 1050 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 OR5B2Q96R09 309 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 SPATA9Q9BWV2 254 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 TMEM38AQ9H6F2 299 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 GLRX2Q9NS18 164 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 MRGBPQ9NV56 204 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 IFT52Q9Y366 437 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 EMC9Q9Y3B6 208 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 SPIN1Q9Y657 262 aaPredicted RBP18.2■□□□□ 0.5
FOXA1-203ENST00000553751 PDZD2O15018 2839 aa18.2■□□□□ 0.5
FOXA1-203ENST00000553751 UQCRBP14927 111 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 ETS2P15036 469 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 ACAA2P42765 397 aaKnown RBP18.19■□□□□ 0.5
FOXA1-203ENST00000553751 SLC1A3P43003 542 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 HTR3AP46098 478 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 MTPNP58546 118 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 NFYCQ13952 458 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 ZSWIM7Q19AV6 140 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 ZNF311Q5JNZ3 666 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 REEP3Q6NUK4 255 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 FCRLAQ7L513 359 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 ADGRG3Q86Y34 549 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 C10orf82Q8WW14 230 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 REXO5Q96IC2 774 aaKnown RBP18.19■□□□□ 0.5
FOXA1-203ENST00000553751 RSPO3Q9BXY4 272 aaPredicted RBP18.19■□□□□ 0.5
FOXA1-203ENST00000553751 CACYBPQ9HB71 228 aaKnown RBP18.19■□□□□ 0.5
FOXA1-203ENST00000553751 OSGIN1Q9UJX0 560 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 PROCRQ9UNN8 238 aa18.19■□□□□ 0.5
FOXA1-203ENST00000553751 TUBAL3A6NHL2 446 aa18.18■□□□□ 0.5
FOXA1-203ENST00000553751 ENPP1P22413 925 aa18.18■□□□□ 0.5
FOXA1-203ENST00000553751 TACR3P29371 465 aa18.18■□□□□ 0.5
FOXA1-203ENST00000553751 AGTR1P30556 359 aa18.18■□□□□ 0.5
FOXA1-203ENST00000553751 DIO1P49895 249 aa18.18■□□□□ 0.5
FOXA1-203ENST00000553751 POLR2HP52434 150 aaKnown RBP18.18■□□□□ 0.5
FOXA1-203ENST00000553751 CTBP2P56545 445 aa18.18■□□□□ 0.5
FOXA1-203ENST00000553751 KLF10Q13118 480 aa18.18■□□□□ 0.5
FOXA1-203ENST00000553751 SCARB2Q14108 478 aa18.18■□□□□ 0.5
FOXA1-203ENST00000553751 RNPS1Q15287 305 aaKnown RBP18.18■□□□□ 0.5
FOXA1-203ENST00000553751 FAM222BQ8WU58 562 aa18.18■□□□□ 0.5
FOXA1-203ENST00000553751 OR11A1Q9GZK7 315 aa18.18■□□□□ 0.5
FOXA1-203ENST00000553751 ZNF232Q9UNY5 417 aa18.18■□□□□ 0.5
FOXA1-203ENST00000553751 MYO9AB2RTY4 2548 aa18.17■□□□□ 0.5
FOXA1-203ENST00000553751 TMED7-TICAM2A0A0A6YYA0 188 aa18.17■□□□□ 0.5
FOXA1-203ENST00000553751 IGHV3-15A0A0B4J1V0 119 aa18.17■□□□□ 0.5
FOXA1-203ENST00000553751 SMAD9O15198 467 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms