RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 JUNBP17275 347 aaPredicted RBP14.6□□□□□ -0.07
ACTN1-209ENST00000553659 TNFRSF1BP20333 461 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 NT5EP21589 574 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 GALNSP34059 522 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 CLK3P49761 638 aaKnown RBP14.6□□□□□ -0.07
ACTN1-209ENST00000553659 SSR4P51571 173 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 HSD17B7P56937 341 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 FUT5Q11128 374 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 DGCR6Q14129 220 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 EMC4Q5J8M3 183 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 ZNF311Q5JNZ3 666 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 EXOSC6Q5RKV6 272 aaKnown RBP14.6□□□□□ -0.07
ACTN1-209ENST00000553659 GPALPP1Q8IXQ4 340 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 DMRTC2Q8IXT2 367 aaPredicted RBP14.6□□□□□ -0.07
ACTN1-209ENST00000553659 PEX5LQ8IYB4 626 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 TOR1AIP2Q8NFQ8 470 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 IPCEF1Q8WWN9 437 aaPredicted RBP14.6□□□□□ -0.07
ACTN1-209ENST00000553659 KAT2AQ92830 837 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 C16orf58Q96GQ5 468 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 ARHGDIGQ99819 225 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 YIPF3Q9GZM5 350 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 RBM38Q9H0Z9 239 aaKnown RBP14.6□□□□□ -0.07
ACTN1-209ENST00000553659 DEFB127Q9H1M4 99 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 SLC38A1Q9H2H9 487 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 ANKRD19PQ9H560 264 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 ARMC7Q9H6L4 198 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 MTHFD2LQ9H903 347 aaPredicted RBP14.6□□□□□ -0.07
ACTN1-209ENST00000553659 PRTFDC1Q9NRG1 225 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 DEPPQ9NTK1 212 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 ZNF232Q9UNY5 417 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 CLDN16Q9Y5I7 305 aa14.6□□□□□ -0.07
ACTN1-209ENST00000553659 FAM90A27PA6NNH2 459 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 SLC1A7O00341 560 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 FGF17O60258 216 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 CTNSO60931 367 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 ANGPTL1O95841 491 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 THBS1P07996 1170 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 HOXD4P09016 255 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-209ENST00000553659 CBLP22681 906 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 MSX1P28360 303 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 GGT2P36268 569 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 IFNGR2P38484 337 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 UGT2B15P54855 530 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 RPP38P78345 283 aaKnown RBP14.59□□□□□ -0.07
ACTN1-209ENST00000553659 PMPCAQ10713 525 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 CDK5R2Q13319 367 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 LARS2Q15031 903 aaKnown RBP14.59□□□□□ -0.07
ACTN1-209ENST00000553659 LTB4RQ15722 352 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 ZSWIM7Q19AV6 140 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 CNPY1Q3B7I2 92 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 DEF8Q6ZN54 512 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 RPRMLQ8N4K4 120 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 PSD4Q8NDX1 1056 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 ZNF420Q8TAQ5 688 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-209ENST00000553659 ZNF559Q9BR84 538 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 YIPF4Q9BSR8 244 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 FNDC11Q9BVV2 318 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 NMNAT1Q9HAN9 279 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-209ENST00000553659 EQTNQ9NQ60 294 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 PTTG2Q9NZH5 202 aa14.59□□□□□ -0.07
ACTN1-209ENST00000553659 ARHGAP21Q5T5U3 1957 aa14.58□□□□□ -0.07
ACTN1-209ENST00000553659 CCDC160A6NGH7 325 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 TMEM200CA6NKL6 621 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 TGFBR3LH3BV60 316 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 PRKNO60260 465 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-209ENST00000553659 OR10H2O60403 315 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 OR2J2O76002 312 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 ELK4P28324 431 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 YAP1P46937 504 aaKnown RBP14.58□□□□□ -0.08
ACTN1-209ENST00000553659 NR0B1P51843 470 aaKnown RBP14.58□□□□□ -0.08
ACTN1-209ENST00000553659 CDH15P55291 814 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 PPIAP62937 165 aaKnown RBP14.58□□□□□ -0.08
ACTN1-209ENST00000553659 IGLV3-21P80748 117 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-209ENST00000553659 MAP4K2Q12851 820 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 COX10Q12887 443 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 SLC13A2Q13183 592 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 SERTAD2Q14140 314 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 LAPTM4AQ15012 233 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 MAD2L1BPQ15013 274 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-209ENST00000553659 ZNHIT3Q15649 155 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-209ENST00000553659 PRICKLE4Q2TBC4 344 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 GXYLT1Q4G148 440 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 ANKRD34AQ69YU3 496 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 FAM111BQ6SJ93 734 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 CCDC71Q8IV32 467 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-209ENST00000553659 GALNT12Q8IXK2 581 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 OR2M7Q8NG81 312 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 OR52J3Q8NH60 311 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 ASB15Q8WXK1 588 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 CTHRC1Q96CG8 243 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 SLC35A4Q96G79 324 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 DGCR6LQ9BY27 220 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 ZDHHC11Q9H8X9 412 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 ADAP2Q9NPF8 381 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 HPF1Q9NWY4 346 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 MAT2BQ9NZL9 334 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 MYOTQ9UBF9 498 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 KCNN3Q9UGI6 736 aa14.58□□□□□ -0.08
ACTN1-209ENST00000553659 RSL24D1Q9UHA3 163 aaKnown RBP14.58□□□□□ -0.08
ACTN1-209ENST00000553659 WDR45Q9Y484 360 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms