RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 CCNJQ5T5M9 372 aa11.95□□□□□ -0.5
PRPF39-204ENST00000553605 GALNT18Q6P9A2 607 aa11.95□□□□□ -0.5
PRPF39-204ENST00000553605 LRIG3Q6UXM1 1119 aa11.95□□□□□ -0.5
PRPF39-204ENST00000553605 CARM1Q86X55 608 aa11.95□□□□□ -0.5
PRPF39-204ENST00000553605 ACPTQ9BZG2 426 aa11.95□□□□□ -0.5
PRPF39-204ENST00000553605 RACGAP1Q9H0H5 632 aa11.95□□□□□ -0.5
PRPF39-204ENST00000553605 SLITRK2Q9H156 845 aa11.95□□□□□ -0.5
PRPF39-204ENST00000553605 DYNLRB1Q9NP97 96 aa11.95□□□□□ -0.5
PRPF39-204ENST00000553605 SLC52A3Q9NQ40 469 aa11.95□□□□□ -0.5
PRPF39-204ENST00000553605 SLC7A10Q9NS82 523 aa11.95□□□□□ -0.5
PRPF39-204ENST00000553605 ZNF225Q9UK10 706 aa11.95□□□□□ -0.5
PRPF39-204ENST00000553605 TMCO1Q9UM00 188 aa11.95□□□□□ -0.5
PRPF39-204ENST00000553605 KMT2CQ8NEZ4 4911 aaKnown RBP11.94□□□□□ -0.5
PRPF39-204ENST00000553605 TMEM129A0AVI4 362 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 H3BNH8 94 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 ULK1O75385 1050 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 HSPA4LO95757 839 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 IGFBP1P08833 259 aaPredicted RBP11.94□□□□□ -0.5
PRPF39-204ENST00000553605 SAGP10523 405 aaPredicted RBP11.94□□□□□ -0.5
PRPF39-204ENST00000553605 NPR2P20594 1047 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 FPR2P25090 351 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 GPC1P35052 558 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 IL13RA1P78552 427 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 BTKQ06187 659 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 ZNF763Q0D2J5 394 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 HSPB3Q12988 150 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 QPRTQ15274 297 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 DUSP5Q16690 384 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 NDUFAF6Q330K2 333 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 TIGD2Q4W5G0 525 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 HIKESHIQ53FT3 197 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 KLHL26Q53HC5 615 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 MROH9Q5TGP6 573 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 FAM71E1Q6IPT2 247 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 ANKRD16Q6P6B7 361 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 CASP12Q6UXS9 341 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 ZNF551Q7Z340 670 aaPredicted RBP11.94□□□□□ -0.5
PRPF39-204ENST00000553605 SPATA21Q7Z572 469 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 KLHL7Q8IXQ5 586 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 OR4F15Q8NGB8 312 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 RFWD2Q8NHY2 731 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 NANPQ8TBE9 248 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 ZNF483Q8TF39 744 aaPredicted RBP11.94□□□□□ -0.5
PRPF39-204ENST00000553605 QRSL1Q9H0R6 528 aaKnown RBP11.94□□□□□ -0.5
PRPF39-204ENST00000553605 G6PC2Q9NQR9 355 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 SERINC1Q9NRX5 453 aa11.94□□□□□ -0.5
PRPF39-204ENST00000553605 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 ETV2O00321 342 aaPredicted RBP11.93□□□□□ -0.5
PRPF39-204ENST00000553605 WNT9BO14905 357 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 SMIM24O75264 130 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 RPS17P08708 135 aaKnown RBP11.93□□□□□ -0.5
PRPF39-204ENST00000553605 ADRA2AP08913 450 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 GSTA2P09210 222 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 RBP1P09455 135 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 NUDT17P0C025 328 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 ANPEPP15144 967 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 ADRA2CP18825 462 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 CDH2P19022 906 aaPredicted RBP11.93□□□□□ -0.5
PRPF39-204ENST00000553605 MPGP29372 298 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 THBS4P35443 961 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 SLC16A1P53985 500 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 MYBPC1Q00872 1141 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 NAAAQ02083 359 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 TSPO2Q5TGU0 170 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 RBMS3Q6XE24 437 aaKnown RBP11.93□□□□□ -0.5
PRPF39-204ENST00000553605 COX18Q8N8Q8 333 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 NUP37Q8NFH4 326 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 OR5W2Q8NH69 310 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 PIGXQ8TBF5 258 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 C22orf15Q8WYQ4 148 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 ZHX1-C8orf76Q96EF9 292 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 GIMAP5Q96F15 307 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 OTUB1Q96FW1 271 aaPredicted RBP11.93□□□□□ -0.5
PRPF39-204ENST00000553605 C1QTNF5Q9BXJ0 243 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 TMPRSS13Q9BYE2 586 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 TPK1Q9H3S4 243 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 ZNF442Q9H7R0 627 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 OBP2BQ9NPH6 170 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 PARPBPQ9NWS1 579 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 GIN1Q9NXP7 522 aa11.93□□□□□ -0.5
PRPF39-204ENST00000553605 ALOX5P09917 674 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 PRTN3P24158 256 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 COL8A2P25067 703 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 LMO4P61968 165 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 POU6F2P78424 691 aaPredicted RBP11.92□□□□□ -0.5
PRPF39-204ENST00000553605 CBFBQ13951 182 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 SYT14P1Q58G82 188 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 ELFN2Q5R3F8 820 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 SZRD1Q7Z422 152 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 CCDC103Q8IW40 242 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 RNF217Q8TC41 542 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 CKAP2Q8WWK9 683 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 C16orf58Q96GQ5 468 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 ANKRD27Q96NW4 1050 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 BTBD2Q9BX70 525 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 HOXD1Q9GZZ0 328 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 VPS11Q9H270 941 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 SIRT5Q9NXA8 310 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 SNX24Q9Y343 169 aa11.92□□□□□ -0.5
PRPF39-204ENST00000553605 A0A0G2JMP0 313 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms