RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PDK3Q15120 406 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 SWI5Q1ZZU3 235 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 MST1LQ2TV78 715 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 RFTN2Q52LD8 501 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-209ENST00000553308 SYT14P1Q58G82 188 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 TMPPEQ6ZT21 453 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 MTDHQ86UE4 582 aaKnown RBP7.95□□□□□ -1.14
SYNE2-209ENST00000553308 MEX3DQ86XN8 651 aaKnown RBP7.95□□□□□ -1.14
SYNE2-209ENST00000553308 C17orf53Q8N3J3 647 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-209ENST00000553308 ANKS4BQ8N8V4 417 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 OR7A2PQ8NGA2 310 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 OR52E4Q8NGH9 312 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 ADAMTS15Q8TE58 950 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 IFT81Q8WYA0 676 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 MUS81Q96NY9 551 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 FOXN4Q96NZ1 517 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 TRMOQ9BU70 441 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 THUMPD3Q9BV44 507 aaKnown RBP7.95□□□□□ -1.14
SYNE2-209ENST00000553308 ACTRT3Q9BYD9 372 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 PLA2G12AQ9BZM1 189 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 TUBB1Q9H4B7 451 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 FKRPQ9H9S5 495 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 GRPEL1Q9HAV7 217 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 GPATCH2Q9NW75 528 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 FIS1Q9Y3D6 152 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 FKBP7Q9Y680 259 aa7.95□□□□□ -1.14
SYNE2-209ENST00000553308 ARFGEF3Q5TH69 2177 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 ANK2Q01484 3957 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 LRP5LA4QPB2 252 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 SERINC4A6NH21 518 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 H3BQF6 201 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 PDLIM1O00151 329 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 NDUFS8O00217 210 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 LSM1O15116 133 aaKnown RBP7.94□□□□□ -1.14
SYNE2-209ENST00000553308 SCAMP2O15127 329 aaKnown RBP7.94□□□□□ -1.14
SYNE2-209ENST00000553308 TCF21O43680 179 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 DNAJA2O60884 412 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 PROCP04070 461 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 LINC00032P0C843 101 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 TFPIP10646 304 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 LAMP1P11279 417 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 ZNF23P17027 643 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 CFPP27918 469 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 CCT3P49368 545 aaKnown RBP7.94□□□□□ -1.14
SYNE2-209ENST00000553308 RPS26P62854 115 aaKnown RBP7.94□□□□□ -1.14
SYNE2-209ENST00000553308 CKAP4Q07065 602 aaKnown RBP7.94□□□□□ -1.14
SYNE2-209ENST00000553308 MLC1Q15049 377 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 SPDYE7PQ495Y7 208 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 GALNTL6Q49A17 601 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 IQCCQ4KMZ1 466 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 CFAP157Q5JU67 520 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 LIPMQ5VYY2 423 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 OR7E24Q6IFN5 339 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 CASP12Q6UXS9 341 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 OLIG3Q7RTU3 272 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 CCDC103Q8IW40 242 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 RFLNBQ8N5W9 214 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-209ENST00000553308 OR56A1Q8NGH5 318 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 OR5D16Q8NGK9 328 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 OR5AK3PQ8NH89 298 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 ACMSDQ8TDX5 336 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 MZB1Q8WU39 189 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 SLC25A43Q8WUT9 341 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-209ENST00000553308 ST8SIA1Q92185 356 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 ARL8AQ96BM9 186 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 MTERF3Q96E29 417 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 CCDC126Q96EE4 140 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 ARL5BQ96KC2 179 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 OR7D2Q96RA2 312 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 OR11A1Q9GZK7 315 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 BPESC1Q9GZL8 116 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 LAT2Q9GZY6 243 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 TSPYL1Q9H0U9 437 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 C12orf65Q9H3J6 166 aaKnown RBP7.94□□□□□ -1.14
SYNE2-209ENST00000553308 SLC17A5Q9NRA2 495 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 SERINC1Q9NRX5 453 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 ATP6V1HQ9UI12 483 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 KCNE5Q9UJ90 142 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 FAF1Q9UNN5 650 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-209ENST00000553308 MOKQ9UQ07 419 aa7.94□□□□□ -1.14
SYNE2-209ENST00000553308 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.94□□□□□ -1.14
SYNE2-209ENST00000553308 A0A1W2PPM1 405 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 LOC390937A0A1W2PQ73 354 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 SPRY1O43609 319 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-209ENST00000553308 GLRA3O75311 464 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 BCAS1O75363 584 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-209ENST00000553308 MRPL33O75394 65 aaKnown RBP7.93□□□□□ -1.14
SYNE2-209ENST00000553308 SLU7O95391 586 aaKnown RBP7.93□□□□□ -1.14
SYNE2-209ENST00000553308 PMS2P2O95744 297 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 C6orf47O95873 294 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 CSTAP01040 98 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 ABHD2P08910 425 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 UBTFL6P0CB48 400 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-209ENST00000553308 NEFHP12036 1026 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 BCKDHAP12694 445 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 IL2RGP31785 369 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 HPCAL1P37235 193 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 ASMTP46597 345 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 SLC16A1P53985 500 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms