RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 LCE2AQ5TA79 106 aaPredicted RBP4.48□□□□□ -1.69
CKAP4-203ENST00000553039 LGSNQ5TDP6 509 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 DCAF12L2Q5VW00 463 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 OLFML2AQ68BL7 652 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 C18orf63Q68DL7 685 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 REP15Q6BDI9 236 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 FAM111BQ6SJ93 734 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 CYP20A1Q6UW02 462 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 CES3Q6UWW8 571 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 B3GLCTQ6Y288 498 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 ETV3LQ6ZN32 361 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 SPATA19Q7Z5L4 167 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 GGNQ86UU5 652 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 SLC44A2Q8IWA5 706 aaPredicted RBP4.48□□□□□ -1.69
CKAP4-203ENST00000553039 ZCCHC7Q8N3Z6 543 aaKnown RBP4.48□□□□□ -1.69
CKAP4-203ENST00000553039 KIR3DL3Q8N743 410 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 ZNF433Q8N7K0 673 aaPredicted RBP4.48□□□□□ -1.69
CKAP4-203ENST00000553039 PIK3C3Q8NEB9 887 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 OR5M1Q8NGP8 315 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 OR6Y1Q8NGX8 325 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 OR52N5Q8NH56 324 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 C22orf15Q8WYQ4 148 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 SGCDQ92629 289 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 TMBIM1Q969X1 311 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 CPNE4Q96A23 557 aaPredicted RBP4.48□□□□□ -1.69
CKAP4-203ENST00000553039 LINGO1Q96FE5 620 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 MUS81Q96NY9 551 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 SERPINB12Q96P63 405 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 EGFL8Q99944 293 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 EFCAB11Q9BUY7 163 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 C1orf43Q9BWL3 253 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 C1QTNF6Q9BXI9 259 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 PLK3Q9H4B4 646 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 LYARQ9NX58 379 aaKnown RBP4.48□□□□□ -1.69
CKAP4-203ENST00000553039 TREM2Q9NZC2 230 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 EHD3Q9NZN3 535 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 NPAP1Q9NZP6 1156 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 SLAMF8Q9P0V8 285 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 KLHL9Q9P2J3 617 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 SLC17A6Q9P2U8 582 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 MRTO4Q9UKD2 239 aaKnown RBP4.48□□□□□ -1.69
CKAP4-203ENST00000553039 FBXO5Q9UKT4 447 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 GUCA1BQ9UMX6 200 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 MTO1Q9Y2Z2 717 aaKnown RBP4.48□□□□□ -1.69
CKAP4-203ENST00000553039 REXO2Q9Y3B8 237 aaKnown RBP4.48□□□□□ -1.69
CKAP4-203ENST00000553039 DTNAQ9Y4J8 743 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 SLC25A15Q9Y619 301 aa4.48□□□□□ -1.69
CKAP4-203ENST00000553039 CLPSL1A2RUU4 121 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 DNAJC9-AS1A6NH13 148 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 GLOD5A6NK44 160 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 WASHC1A8K0Z3 465 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 RTCAO00442 366 aaKnown RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 TNFSF11O14788 317 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 DHHO43323 396 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 PSPNO60542 156 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 GUCY1B2O75343 617 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 ACTL6BO94805 426 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 HAUS5O94927 633 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 WDR47O94967 919 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 MPZL1O95297 269 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 NTN1O95631 604 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 TBX6O95947 436 aaPredicted RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 WNT11O96014 354 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 IGLV1-40P01703 118 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 HPXP02790 462 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 CD1AP06126 327 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 SAGP10523 405 aaPredicted RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 NR2F6P10588 404 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 BTF3P20290 206 aaKnown RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 S1PR1P21453 382 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 IGHV1-2P23083 117 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 FEN1P39748 380 aaKnown RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 RFX3P48380 749 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 GAS1P54826 345 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 HADHBP55084 474 aaKnown RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 PRPS1P60891 318 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 CRADDP78560 199 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 CDKL1Q00532 357 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 CDK16Q00536 496 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 TGFBR3Q03167 851 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 DHX34Q14147 1143 aaKnown RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 TRIP10Q15642 601 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 C2orf68Q2NKX9 166 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 SLC9B1Q4ZJI4 515 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 KHDRBS2Q5VWX1 349 aaKnown RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 ANKRD22Q5VYY1 191 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 FBXW9Q5XUX1 488 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 RHOUQ7L0Q8 258 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 FCRLAQ7L513 359 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 KRT74Q7RTS7 529 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 LILRA2Q8N149 483 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 UBE2J2Q8N2K1 259 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 CEP112Q8N8E3 955 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 OR4F15Q8NGB8 312 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 CLDND2Q8NHS1 167 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 ZNF473Q8WTR7 871 aaKnown RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 ATG4AQ8WYN0 398 aa4.47□□□□□ -1.69
CKAP4-203ENST00000553039 DVL3Q92997 716 aaPredicted RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 PDLIM5Q96HC4 596 aaKnown RBP4.47□□□□□ -1.69
CKAP4-203ENST00000553039 ARL5BQ96KC2 179 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms