RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 NUDT2P50583 147 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 TPD52P55327 224 aaPredicted RBP10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 MERTKQ12866 999 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 VMACQ2NL98 169 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 SLC25A35Q3KQZ1 300 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 PDSS1Q5T2R2 415 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 GKAP1Q5VSY0 366 aaPredicted RBP10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 C8orf82Q6P1X6 216 aaPredicted RBP10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 ERICH5Q6P6B1 374 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 PLEKHM3Q6ZWE6 761 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 ZNF550Q7Z398 422 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 PATL1Q86TB9 770 aaKnown RBP10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 ARMC8Q8IUR7 673 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 CCDC71Q8IV32 467 aaPredicted RBP10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 LILRA2Q8N149 483 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 CLIP4Q8N3C7 705 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 C9orf106Q8NAJ2 232 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 NAXEQ8NCW5 288 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 OR10D3Q8NH80 312 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 OR2V1Q8NHB1 315 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 LRRC37BQ96QE4 947 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 CCT8L2Q96SF2 557 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 ECSITQ9BQ95 431 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 GPATCH1Q9BRR8 931 aaKnown RBP10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 PINK1Q9BXM7 581 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 COQ10BQ9H8M1 238 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 EVA1AQ9H8M9 152 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 EFCAB1Q9HAE3 211 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 SERINC1Q9NRX5 453 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 CHRNA9Q9UGM1 479 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 ADAM21Q9UKJ8 722 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 SPIN1Q9Y657 262 aaPredicted RBP10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 A0A0J9YW62 118 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 TNFSF11O14788 317 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 AIM2O14862 343 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 EFNA2O43921 213 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 RCBTB2O95199 551 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 TMIGD3P0DMS9 266 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 FKBP2P26885 142 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 SHC1P29353 583 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 SLC7A1P30825 629 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 SFTPDP35247 375 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 ACAA2P42765 397 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 SLC1A3P43003 542 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 EIF1AXP47813 144 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 IDH2P48735 452 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 POLR2HP52434 150 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 ZNF136P52737 540 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 PON3Q15166 354 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 CDSNQ15517 529 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 SYT14P1Q58G82 188 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 HBMQ6B0K9 141 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 OR2A2Q6IF42 318 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 CCDC80Q76M96 950 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 P4HA3Q7Z4N8 544 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 LILRB4Q8NHJ6 448 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 CPNE4Q96A23 557 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 ZNF845Q96IR2 970 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 HOPXQ9BPY8 73 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 SFXN3Q9BWM7 321 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 RNF122Q9H9V4 155 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 ZNF629Q9UEG4 869 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 TESQ9UGI8 421 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 MCTS1Q9ULC4 181 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 CELSR2Q9HCU4 2923 aa10.52□□□□□ -0.73
TRAFD1-209ENST00000552896 FAM90A27PA6NNH2 459 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 PRSS44E7EML9 344 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 SYT5O00445 386 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 NDUFAB1O14561 156 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 DVL2O14641 736 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 MFN2O95140 757 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 TGM6O95932 706 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 IL18BPO95998 194 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 CRHP06850 196 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 GKN3PP0CG01 181 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 CTSSP25774 331 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 HTR1EP28566 365 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 MAP2K6P52564 334 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 COPZ1P61923 177 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 DMTNQ08495 405 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 VEZF1Q14119 521 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 SGCBQ16585 318 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 ZNF239Q16600 458 aaKnown RBP10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 WBP2NLQ6ICG8 309 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 COMTD1Q86VU5 262 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 RELL2Q8NC24 303 aaPredicted RBP10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 CCDC197Q8NCU1 140 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 OR2T12Q8NG77 320 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 FNDC9Q8TBE3 224 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 RASSF5Q8WWW0 418 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 FIG4Q92562 907 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 ZNF583Q96ND8 569 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 RSPO3Q9BXY4 272 aaPredicted RBP10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 CHST11Q9NPF2 352 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 TIGARQ9NQ88 270 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 CTPS2Q9NRF8 586 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 KLHL28Q9NXS3 571 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 ABCD2Q9UBJ2 740 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 DCHS2Q6V1P9 2916 aa10.51□□□□□ -0.73
TRAFD1-209ENST00000552896 FREM1Q5H8C1 2179 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms