RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 J3QRE1 110 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 AGRPO00253 132 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 WWP2O00308 870 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 SCDO00767 359 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 REM1O75628 298 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 OR7A10O76100 309 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 CPEP16870 476 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 MST1P26927 711 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 CRYBB2P43320 205 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 NR0B1P51843 470 aaKnown RBP10.54□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF404Q494X3 552 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF362Q5T0B9 420 aaPredicted RBP10.54□□□□□ -0.72
RAB5C-208ENST00000551338 SLC35F1Q5T1Q4 408 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 PRPF38BQ5VTL8 546 aaKnown RBP10.54□□□□□ -0.72
RAB5C-208ENST00000551338 HLA-DQA1Q5Y7H0 255 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 FAAH2Q6GMR7 532 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 WBP2NLQ6ICG8 309 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 CBLN3Q6UW01 205 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 GDPGP1Q6ZNW5 385 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 SHISA6Q6ZSJ9 500 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 ATG4DQ86TL0 474 aaPredicted RBP10.54□□□□□ -0.72
RAB5C-208ENST00000551338 IGFN1Q86VF2 1251 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 C1orf210Q8IVY1 113 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 SIRT6Q8N6T7 355 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 OR1N1Q8NGS0 311 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 FNDC8Q8TC99 324 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 IFI44Q8TCB0 444 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 S100ZQ8WXG8 99 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF524Q96C55 264 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 OMA1Q96E52 524 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 HSPBAP1Q96EW2 488 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 CDADC1Q9BWV3 514 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 RTN4RQ9BZR6 473 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 WDR12Q9GZL7 423 aaKnown RBP10.54□□□□□ -0.72
RAB5C-208ENST00000551338 H2AFY2Q9P0M6 372 aaPredicted RBP10.54□□□□□ -0.72
RAB5C-208ENST00000551338 MRTO4Q9UKD2 239 aaKnown RBP10.54□□□□□ -0.72
RAB5C-208ENST00000551338 RARRES3Q9UL19 164 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 STUB1Q9UNE7 303 aa10.54□□□□□ -0.72
RAB5C-208ENST00000551338 ASCC3Q8N3C0 2202 aaKnown RBP10.54□□□□□ -0.72
RAB5C-208ENST00000551338 UNC80Q8N2C7 3258 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 IGHV3-20A0A0C4DH32 117 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 A0A1W2PQD3 144 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 LRRN3E7EW58 273 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 ADAM10O14672 748 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF264O43296 627 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 PPM1BO75688 479 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 SCRG1O75711 98 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 ONECUT2O95948 504 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 LALBAP00709 142 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 SLC2A5P22732 501 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 IL12BP29460 328 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 NOS3P29474 1203 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 SLC9A3P48764 834 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 CCR4P51679 360 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 COPZ1P61923 177 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF117Q03924 483 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 PLCXD2Q0VAA5 305 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 TPBGQ13641 420 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 CRMP1Q14194 572 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF791Q3KP31 576 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-208ENST00000551338 NKAIN1Q4KMZ8 207 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 ARMC4Q5T2S8 1044 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 LIPKQ5VXJ0 399 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 FCRLBQ6BAA4 426 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 PWWP2BQ6NUJ5 590 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 ARHGAP11AQ6P4F7 1023 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 MEPCEQ7L2J0 689 aaKnown RBP10.53□□□□□ -0.72
RAB5C-208ENST00000551338 SLC29A4Q7RTT9 530 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 BTLAQ7Z6A9 289 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 ANKRD37Q7Z713 158 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 OAFQ86UD1 273 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 TMCO5AQ8N6Q1 288 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 TMEM99Q8N816 258 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 SLC37A3Q8NCC5 494 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 PSD4Q8NDX1 1056 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 NFAM1Q8NET5 270 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-208ENST00000551338 OR9Q1Q8NGQ5 310 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 ADOQ96SZ5 270 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 ARHGAP9Q9BRR9 750 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 SLC7A5P2Q9GIP4 190 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 LAT2Q9GZY6 243 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 MMP27Q9H306 513 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 HMG20AQ9NP66 347 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 EXOSC4Q9NPD3 245 aaKnown RBP10.53□□□□□ -0.72
RAB5C-208ENST00000551338 CHCHD3Q9NX63 227 aaKnown RBP10.53□□□□□ -0.72
RAB5C-208ENST00000551338 ERVK13-1Q9NX77 482 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 TNFRSF10DQ9UBN6 386 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 COPS7AQ9UBW8 275 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 CHRNA9Q9UGM1 479 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 B3GNT3Q9Y2A9 372 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 YARS2Q9Y2Z4 477 aaKnown RBP10.53□□□□□ -0.72
RAB5C-208ENST00000551338 SF3B6Q9Y3B4 125 aaKnown RBP10.53□□□□□ -0.72
RAB5C-208ENST00000551338 SPIN1Q9Y657 262 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-208ENST00000551338 A3GALT2U3KPV4 340 aa10.53□□□□□ -0.72
RAB5C-208ENST00000551338 KIF26BQ2KJY2 2108 aa10.52□□□□□ -0.72
RAB5C-208ENST00000551338 EML6Q6ZMW3 1958 aa10.52□□□□□ -0.72
RAB5C-208ENST00000551338 XIRP2A4UGR9 3374 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 RALGAPA1Q6GYQ0 2036 aa10.52□□□□□ -0.73
RAB5C-208ENST00000551338 ELOA3DA6NLF2 546 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-208ENST00000551338 RIIAD1A6NNX1 92 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms