RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 SELENBP1Q13228 472 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 C2orf68Q2NKX9 166 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 TBRG1Q3YBR2 411 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 SYT10Q6XYQ8 523 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 CCDC103Q8IW40 242 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 FAM9CQ8IZT9 166 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 LINC01006Q8NI28 216 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 GTF3AQ92664 365 aaKnown RBP11.45□□□□□ -0.58
SNRPF-203ENST00000551316 OTUB1Q96FW1 271 aaPredicted RBP11.45□□□□□ -0.58
SNRPF-203ENST00000551316 CALR3Q96L12 384 aaKnown RBP11.45□□□□□ -0.58
SNRPF-203ENST00000551316 CHIAQ9BZP6 476 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 NECAP2Q9NVZ3 263 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 NUDT4Q9NZJ9 180 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 CRNNQ9UBG3 495 aaPredicted RBP11.45□□□□□ -0.58
SNRPF-203ENST00000551316 ASH2LQ9UBL3 628 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 TESQ9UGI8 421 aaKnown RBP11.45□□□□□ -0.58
SNRPF-203ENST00000551316 MTO1Q9Y2Z2 717 aaKnown RBP11.45□□□□□ -0.58
SNRPF-203ENST00000551316 CACNG2Q9Y698 323 aa11.45□□□□□ -0.58
SNRPF-203ENST00000551316 IGHV2OR16-5A0A0B4J2B6 119 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 OR6C65A6NJZ3 312 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 GJE1A6NN92 205 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 TRIM49D1C9J1S8 452 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 KIF2AO00139 706 aaPredicted RBP11.44□□□□□ -0.58
SNRPF-203ENST00000551316 MPIG6BO95866 241 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 WNT11O96014 354 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 OPN1MWP04001 364 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 S100BP04271 92 aaPredicted RBP11.44□□□□□ -0.58
SNRPF-203ENST00000551316 TPM1P09493 284 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 CSF1P09603 554 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 OPN1MW2P0DN77 364 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 OPN1MW3P0DN78 364 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 GABRA3P34903 492 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 EIF1P41567 113 aaKnown RBP11.44□□□□□ -0.58
SNRPF-203ENST00000551316 MAGEB1P43366 347 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 TMEM33P57088 247 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 DBPQ10586 325 aaPredicted RBP11.44□□□□□ -0.58
SNRPF-203ENST00000551316 SNTB2Q13425 540 aaKnown RBP11.44□□□□□ -0.58
SNRPF-203ENST00000551316 SLC29A2Q14542 456 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 KRT80Q6KB66 452 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 KLHL24Q6TFL4 600 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 GOLGA7Q7Z5G4 137 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 CCDC170Q8IYT3 715 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 L3MBTL4Q8NA19 623 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 POP5Q969H6 163 aaKnown RBP11.44□□□□□ -0.58
SNRPF-203ENST00000551316 SYT3Q9BQG1 590 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 POPDC3Q9HBV1 291 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 EQTNQ9NQ60 294 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 SLC6A13Q9NSD5 602 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 EMC3Q9P0I2 261 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 SENP1Q9P0U3 644 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 REV1Q9UBZ9 1251 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 LEF1Q9UJU2 399 aaPredicted RBP11.44□□□□□ -0.58
SNRPF-203ENST00000551316 C19orf53Q9UNZ5 99 aaPredicted RBP11.44□□□□□ -0.58
SNRPF-203ENST00000551316 CHMP2BQ9UQN3 213 aa11.44□□□□□ -0.58
SNRPF-203ENST00000551316 C5orf63A6NC05 138 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 M0R233 179 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 OR7A17O14581 309 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 COQ9O75208 318 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 MRPL33O75394 65 aaKnown RBP11.43□□□□□ -0.58
SNRPF-203ENST00000551316 SLITRK5O94991 958 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 JUNP05412 331 aaKnown RBP11.43□□□□□ -0.58
SNRPF-203ENST00000551316 NGFRP08138 427 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 ANPEPP15144 967 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 POU3F1Q03052 451 aaPredicted RBP11.43□□□□□ -0.58
SNRPF-203ENST00000551316 SGO1Q5FBB7 561 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 ZNF362Q5T0B9 420 aaPredicted RBP11.43□□□□□ -0.58
SNRPF-203ENST00000551316 CCNJQ5T5M9 372 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 LINGO2Q7L985 606 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 SYCE1Q8N0S2 351 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 C1orf52Q8N6N3 182 aaKnown RBP11.43□□□□□ -0.58
SNRPF-203ENST00000551316 OR4F15Q8NGB8 312 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 CEP70Q8NHQ1 597 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 TRPC4APQ8TEL6 797 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 RAB39BQ96DA2 213 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 FZR1Q9UM11 496 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 WIPI2Q9Y4P8 454 aa11.43□□□□□ -0.58
SNRPF-203ENST00000551316 TRAPPC2LH3BP13 241 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 SYNGR3O43761 229 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 LGI1O95970 557 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 FGGP02679 453 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 NAT2P11245 290 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 GATA3P23771 443 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 MPGP29372 298 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 MAP3K8P41279 467 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 ALKBH6Q3KRA9 238 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.42□□□□□ -0.58
SNRPF-203ENST00000551316 RNASEH2BQ5TBB1 312 aaKnown RBP11.42□□□□□ -0.58
SNRPF-203ENST00000551316 PAGE2Q7Z2X7 111 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 ISCA2Q86U28 154 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 OR2L13Q8N349 312 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 OR1K1Q8NGR3 316 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 GPR119Q8TDV5 335 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 PHF21AQ96BD5 680 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 UBXN10Q96LJ8 280 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 NOX3Q9HBY0 568 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 OXSMQ9NWU1 459 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 PSME2Q9UL46 239 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 SLC12A4Q9UP95 1085 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 CARD8Q9Y2G2 431 aa11.42□□□□□ -0.58
SNRPF-203ENST00000551316 PLECQ15149 4684 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms