RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	MED17	Q9NVC6	651 aa		11.11	□□□□□ -0.63
ERBB3-208	ENST00000549205	SELENON	Q9NZV5	590 aa		11.11	□□□□□ -0.63
ERBB3-208	ENST00000549205	C15orf41	Q9Y2V0	281 aa		11.11	□□□□□ -0.63
ERBB3-208	ENST00000549205	PCDHGB6	Q9Y5F9	930 aa		11.11	□□□□□ -0.63
ERBB3-208	ENST00000549205		A0A087WZY1	265 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	TRAV17	A0A0B4J275	112 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	SH3PXD2B	A1X283	911 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	KLRC4-KLRK1	H3BQV0	150 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	CBR3	O75828	277 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	PNMT	P11086	282 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	PRKCA	P17252	672 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	TACR3	P29371	465 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	HTR3A	P46098	478 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	CD97	P48960	835 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	ARHGDIA	P52565	204 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	DSCR4	P56555	118 aa	Predicted RBP	11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	KCNAB2	Q13303	367 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	LAPTM4A	Q15012	233 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	LRRC36	Q1X8D7	754 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	SLC25A53	Q5H9E4	307 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	DCST1	Q5T197	706 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	LINC00114	Q6XXX2	140 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	WDR88	Q6ZMY6	472 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	GRINA	Q7Z429	371 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	GALNTL5	Q7Z4T8	443 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	ATG4D	Q86TL0	474 aa	Predicted RBP	11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	STK32C	Q86UX6	486 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	HS3ST5	Q8IZT8	346 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	LINC00471	Q8N535	108 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	RNF217	Q8TC41	542 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	GIPC3	Q8TF64	312 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	ACOT11	Q8WXI4	607 aa	Predicted RBP	11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	SDCCAG3	Q96C92	435 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	DTNBP1	Q96EV8	351 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	BARD1	Q99728	777 aa	Known RBP	11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	PSD2	Q9BQI7	771 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	GABARAPL1	Q9H0R8	117 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	C12orf10	Q9HB07	376 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	PDP1	Q9P0J1	537 aa	Predicted RBP	11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	VDAC3	Q9Y277	283 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	CSAG2	Q9Y5P2	127 aa		11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.1	□□□□□ -0.63
ERBB3-208	ENST00000549205		A0A087WUJ7	227 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205		A0A087WUU8	490 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	C7orf72	A4D263	438 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	ARRDC5	A6NEK1	342 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	PDLIM1	O00151	329 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	SOCS2	O14508	198 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	CCNB2	O95067	398 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	RASAL1	O95294	804 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	NTN1	O95631	604 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	PRKACG	P22612	351 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	DPP4	P27487	766 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	RBM34	P42696	430 aa	Known RBP	11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	MEOX1	P50221	254 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	POLR2H	P52434	150 aa	Known RBP	11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	MERTK	Q12866	999 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	ELOA3B	Q3SY89	546 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	TBPL2	Q6SJ96	375 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	ZNF730	Q6ZMV8	503 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	ZBTB49	Q6ZSB9	765 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	CBR4	Q8N4T8	237 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	ELOA3	Q8NG57	546 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	OR10G2	Q8NGC3	310 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	OR4K5	Q8NGD3	323 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	TMEM255B	Q8WV15	326 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	TMEM239	Q8WW34	195 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	ZBTB8A	Q96BR9	441 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	MRGPRX4	Q96LA9	322 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	HS6ST2	Q96MM7	605 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	ZNF426	Q9BUY5	554 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	OSBPL10	Q9BXB5	764 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	VCX3B	Q9H321	246 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	UBQLN3	Q9H347	655 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	COQ10B	Q9H8M1	238 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	OSGIN1	Q9UJX0	560 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	DKKL1	Q9UK85	242 aa		11.09	□□□□□ -0.63
ERBB3-208	ENST00000549205	CFAP46	Q8IYW2	2715 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	EI24	O14681	340 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	OR10H3	O60404	316 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	ZIC3	O60481	467 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	GLS	O94925	669 aa	Predicted RBP	11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	WISP1	O95388	367 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	PDGFA	P04085	211 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	RFPL3S	P0C7P2	107 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	ZNF26	P17031	533 aa	Predicted RBP	11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	HK1	P19367	917 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	CXCR1	P25024	350 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	SRD5A2	P31213	254 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	VHL	P40337	213 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	APOBEC1	P41238	236 aa	Known RBP	11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	EIF1	P41567	113 aa	Known RBP	11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	UGT2B15	P54855	530 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	FOXF1	Q12946	379 aa		11.08	□□□□□ -0.64
ERBB3-208	ENST00000549205	DAG1	Q14118	895 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms