RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 UBE2SQ16763 222 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 MICAQ29983 383 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 CEP55Q53EZ4 464 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 TMEM41BQ5BJD5 291 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 ZNF311Q5JNZ3 666 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 BEND6Q5SZJ8 279 aaPredicted RBP3.14□□□□□ -1.91
PTCH1-216ENST00000548379 RIPPLY2Q5TAB7 128 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 TWF2Q6IBS0 349 aaKnown RBP3.14□□□□□ -1.91
PTCH1-216ENST00000548379 CBLN3Q6UW01 205 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 BTNL3Q6UXE8 466 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 STAC2Q6ZMT1 411 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 FAM228AQ86W67 206 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 ECHDC2Q86YB7 292 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 MARCH9Q86YJ5 346 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 EFCAB13Q8IY85 973 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 SLC22A18ASQ8N1D0 253 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 FADS6Q8N9I5 356 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 TBCKQ8TEA7 893 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 RANBP9Q96S59 729 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 TBC1D10AQ9BXI6 508 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 GCOM2Q9BZD3 368 aaPredicted RBP3.14□□□□□ -1.91
PTCH1-216ENST00000548379 DPH5Q9H2P9 285 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 CWH43Q9H720 699 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 CALHM2Q9HA72 323 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 MEPEQ9NQ76 525 aaPredicted RBP3.14□□□□□ -1.91
PTCH1-216ENST00000548379 IMPAD1Q9NX62 359 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 ARMCX1Q9P291 453 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 GALPQ9UBC7 116 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 XPO7Q9UIA9 1087 aaKnown RBP3.14□□□□□ -1.91
PTCH1-216ENST00000548379 EIF3LQ9Y262 564 aaKnown RBP3.14□□□□□ -1.91
PTCH1-216ENST00000548379 NTNG1Q9Y2I2 539 aa3.14□□□□□ -1.91
PTCH1-216ENST00000548379 NAV1Q8NEY1 1877 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 MYH13Q9UKX3 1938 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 TTC28Q96AY4 2481 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 ESYT2A0FGR8 921 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 TRABD2BA6NFA1 517 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 SMCO2A6NFE2 343 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 TRIM64CA6NLI5 447 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 WASHC1A8K0Z3 465 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 E7EWF7 191 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 HPP00738 406 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 JCHAINP01591 159 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 DCNP07585 359 aaKnown RBP3.13□□□□□ -1.91
PTCH1-216ENST00000548379 UQCRBP14927 111 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 ACADSP16219 412 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 PAICSP22234 425 aaKnown RBP3.13□□□□□ -1.91
PTCH1-216ENST00000548379 MAGEA9P43362 315 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 TRPC1P48995 793 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 ACADVLP49748 655 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 CSTF1Q05048 431 aaKnown RBP3.13□□□□□ -1.91
PTCH1-216ENST00000548379 KLHL30Q0D2K2 578 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 TRIP10Q15642 601 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 PPP1R3AQ16821 1122 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 HIGD2BQ4VC39 106 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 RNLSQ5VYX0 342 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 NIPA1Q7RTP0 329 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 ERASQ7Z444 233 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 CEACAM19Q7Z692 300 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 PLA2G4DQ86XP0 818 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 ZNF573Q86YE8 665 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 ZNF540Q8NDQ6 660 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 OR2L2Q8NH16 312 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 CCDC12Q8WUD4 166 aaPredicted RBP3.13□□□□□ -1.91
PTCH1-216ENST00000548379 VPS35Q96QK1 796 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 MCCC1Q96RQ3 725 aaPredicted RBP3.13□□□□□ -1.91
PTCH1-216ENST00000548379 TMEM175Q9BSA9 504 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 FEM1AQ9BSK4 669 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 TBCDQ9BTW9 1192 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 RPP25Q9BUL9 199 aaKnown RBP3.13□□□□□ -1.91
PTCH1-216ENST00000548379 LY9Q9HBG7 655 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 RBM28Q9NW13 759 aaKnown RBP3.13□□□□□ -1.91
PTCH1-216ENST00000548379 AP4B1Q9Y6B7 739 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 AP1M2Q9Y6Q5 423 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 FRMPD3Q5JV73 1810 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 CLUHO75153 1309 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 PRUNE2Q8WUY3 3088 aa3.13□□□□□ -1.91
PTCH1-216ENST00000548379 TRAV9-2A0A087WT02 112 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 IGKV6D-21A0A0A0MT36 114 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 A0A1W2PQ72 361 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 E9PAM4 449 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 SAP18O00422 153 aaKnown RBP3.12□□□□□ -1.91
PTCH1-216ENST00000548379 SLC17A2O00624 439 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 ANGPT2O15123 496 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 LRRTM2O43300 516 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 GPRIN2O60269 458 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 PEX11AO75192 247 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 ERLIN2O94905 339 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 PLEKHA8P1O95397 391 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 CT45A10P0DMU9 189 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 GNA11P29992 359 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 OR1G1P47890 313 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 ALDH3B2P48448 385 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 RPL34P49207 117 aaKnown RBP3.12□□□□□ -1.91
PTCH1-216ENST00000548379 EMDP50402 254 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 ITGB3BPQ13352 177 aaPredicted RBP3.12□□□□□ -1.91
PTCH1-216ENST00000548379 TGIF1Q15583 401 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 UBE2V2Q15819 145 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 CNPY1Q3B7I2 92 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 EIPR1Q53HC9 387 aa3.12□□□□□ -1.91
PTCH1-216ENST00000548379 HSP90AA5PQ58FG0 334 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms