RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	HCFC1	P51610	2035 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	NBEAL1	Q6ZS30	2694 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	C15orf61	A6NNL5	157 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	RNF212B	A8MTL3	300 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	PDZK1P1	A8MUH7	402 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	MPTX1	A8MV57	137 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211		E7EQ34	232 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	C19orf84	I3L1E1	186 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	SLC33A1	O00400	549 aa	Predicted RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	GAPDHS	O14556	408 aa	Predicted RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	CASQ2	O14958	399 aa	Predicted RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	PALM	O75781	387 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	DFFB	O76075	338 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	OPN1MW	P04001	364 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	UQCRH	P07919	91 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	OPN1MW2	P0DN77	364 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	OPN1MW3	P0DN78	364 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	FOLR1	P15328	257 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	ZNF30	P17039	623 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	PRKACG	P22612	351 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	CA6	P23280	308 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	IL4R	P24394	825 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	PTPN3	P26045	913 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	PBLD	P30039	288 aa	Predicted RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	MC5R	P33032	325 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	RORA	P35398	523 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	SPAM1	P38567	509 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	HSPA9	P38646	679 aa	Known RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	ANP32A	P39687	249 aa	Known RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	CAMP	P49913	170 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	TDGF1P3	P51864	188 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	ARFIP1	P53367	373 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	GMFB	P60983	142 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	SNRPE	P62304	92 aa	Known RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	UBE2I	P63279	158 aa	Known RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	FKBP3	Q00688	224 aa	Known RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	PCGF3	Q3KNV8	242 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	CBWD6	Q4V339	395 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	PHLDA2	Q53GA4	152 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	CBWD3	Q5JTY5	395 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	SHE	Q5VZ18	495 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	TMEM211	Q6ICI0	200 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	KLHL10	Q6JEL2	608 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	PODNL1	Q6PEZ8	512 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	WASH2P	Q6VEQ5	465 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	FAM183BP	Q6ZVS7	135 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	ARC	Q7LC44	396 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	SPATA19	Q7Z5L4	167 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	OOSP2	Q86WS3	158 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	CNTN4	Q8IWV2	1026 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	DNAAF3	Q8N9W5	541 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	ACBD4	Q8NC06	268 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	OR13J1	Q8NGT2	312 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	OR2Y1	Q8NGV0	311 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	VANGL1	Q8TAA9	524 aa	Predicted RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	ST7L	Q8TDW4	575 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	TMEM158	Q8WZ71	300 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	NT5C3B	Q969T7	300 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	ARSG	Q96EG1	525 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	ZNF396	Q96N95	335 aa	Predicted RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	GAL3ST4	Q96RP7	486 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	RUFY1	Q96T51	708 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	MAP3K3	Q99759	626 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	CRACR2A	Q9BSW2	395 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	CARD9	Q9H257	536 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	HSD3B7	Q9H2F3	369 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	HRH4	Q9H3N8	390 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	GNB4	Q9HAV0	340 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	MRM3	Q9HC36	420 aa	Known RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	KCNJ16	Q9NPI9	418 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	GPATCH2L	Q9NWQ4	482 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	SOHLH2	Q9NX45	425 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	PSD3	Q9NYI0	1048 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	LEF1	Q9UJU2	399 aa	Predicted RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	KCNK6	Q9Y257	313 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	BTRC	Q9Y297	605 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	MEMO1	Q9Y316	297 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	MRPS2	Q9Y399	296 aa	Known RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	CHD3	Q12873	2000 aa	Known RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	STAB1	Q9NY15	2570 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	ATR	Q13535	2644 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	DCHS2	Q6V1P9	2916 aa		2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	NSD1	Q96L73	2696 aa	Predicted RBP	2.86	□□□□□ -1.95
RPAP3-205	ENST00000548211	IGHV5-51	A0A0C4DH38	117 aa		2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211	SMIM30	A4D0T7	59 aa		2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211	HTR3E	A5X5Y0	456 aa		2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211	ARHGAP42	A6NI28	874 aa		2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211	ANXA2P2	A6NMY6	339 aa		2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211	C2orf81	A6NN90	581 aa		2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211		A8MX80	341 aa		2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211		A8MZ25	164 aa		2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211	AP3B1	O00203	1094 aa		2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211	PHOX2A	O14813	284 aa		2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211	KMO	O15229	486 aa		2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211	KLRC4	O43908	158 aa		2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211	KLF7	O75840	302 aa	Predicted RBP	2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211	TPPP	O94811	219 aa		2.85	□□□□□ -1.95
RPAP3-205	ENST00000548211	YEATS4	O95619	227 aa		2.85	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms