RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 LOC100653049A0A140TA62 436 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 A0A1W2PNR3 127 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 FAAHO00519 579 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 KRT34O76011 436 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 SLC6A2P23975 617 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 SLC7A1P30825 629 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 ACAA2P42765 397 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 SCARB2Q14108 478 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 GUSBP1Q15486 140 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 MAPRE2Q15555 327 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 ZSWIM7Q19AV6 140 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 TRMT5Q32P41 509 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 MMEL1Q495T6 779 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 COQ5Q5HYK3 327 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 REP15Q6BDI9 236 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 VWA1Q6PCB0 445 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 SNX32Q86XE0 403 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 PTOV1Q86YD1 416 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 ZNF295-AS1Q8N0V1 137 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 STARD4Q96DR4 205 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 LRRC46Q96FV0 321 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 ELAC2Q9BQ52 826 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 RSPO3Q9BXY4 272 aaPredicted RBP16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 PIGMQ9H3S5 423 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 ARMC7Q9H6L4 198 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 TIGARQ9NQ88 270 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 PACSIN3Q9UKS6 424 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 CAPN7Q9Y6W3 813 aa16.77■□□□□ 0.28
PRPF40B-206ENST00000547764 BBIP1A8MTZ0 92 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 MRASO14807 208 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 SLC22A2O15244 555 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 UQCRBP14927 111 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 LSP1P33241 339 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 SLC1A3P43003 542 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 HTR3AP46098 478 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 SIRPAP78324 504 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 SNTB1Q13884 538 aaKnown RBP16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 CYLC2Q14093 348 aaPredicted RBP16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 ZNF239Q16600 458 aaKnown RBP16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 CYP51A1Q16850 503 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 SYT14P1Q58G82 188 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 SPATA21Q7Z572 469 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 BTLAQ7Z6A9 289 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 LUZP2Q86TE4 346 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 ADGRG3Q86Y34 549 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 ROBO4Q8WZ75 1007 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 CPNE4Q96A23 557 aaPredicted RBP16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 LRRC58Q96CX6 371 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 OR5B2Q96R09 309 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 SLC39A3Q9BRY0 314 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 KAT8Q9H7Z6 458 aaKnown RBP16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 CHRNA9Q9UGM1 479 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 FOXD3Q9UJU5 478 aaPredicted RBP16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 NOTCH2Q04721 2471 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 ITPR2Q14571 2701 aa16.76■□□□□ 0.27
PRPF40B-206ENST00000547764 FXYD1O00168 92 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 CCDC22O60826 627 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 PRG2P13727 222 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 TACR3P29371 465 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 NANOGP8Q6NSW7 305 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 FAM214BQ7L5A3 538 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 ZNF550Q7Z398 422 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 SERPINA11Q86U17 422 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 KRT73Q86Y46 540 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 C11orf65Q8NCR3 313 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 HIPK4Q8NE63 616 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 OR10A6Q8NH74 314 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 SLC25A43Q8WUT9 341 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 REXO5Q96IC2 774 aaKnown RBP16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 RBM24Q9BX46 236 aaKnown RBP16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 FAM107BQ9H098 131 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 NANOGQ9H9S0 305 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 OSGIN1Q9UJX0 560 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 CLEC4AQ9UMR7 237 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 SPIN1Q9Y657 262 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 NAV2Q8IVL1 2488 aa16.75■□□□□ 0.27
PRPF40B-206ENST00000547764 TMED7-TICAM2A0A0A6YYA0 188 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 GMNCA6NCL1 334 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 A8MXE2 369 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 SMNDC1O75940 238 aaKnown RBP eCLIP16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 PLGP00747 810 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 NPPAP01160 153 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 CGAP01215 116 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 TFPIP10646 304 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 CCNA2P20248 432 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 DRD4P21917 467 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 AQP1P29972 269 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 PRKAR1BP31321 381 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 POLR2HP52434 150 aaKnown RBP16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 RAC3P60763 192 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 RBBP4Q09028 425 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 NET1Q7Z628 596 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 LSRQ86X29 649 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 ZZZ3Q8IYH5 903 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 POU5F2Q8N7G0 328 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 RNF128Q8TEB7 428 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 GMPPAQ96IJ6 420 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 ZNF607Q96SK3 696 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 SPATA5L1Q9BVQ7 753 aa16.74■□□□□ 0.27
PRPF40B-206ENST00000547764 ADAM19Q9H013 955 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms