RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 TRIM64BA6NI03 449 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 ELOA3DA6NLF2 546 aaPredicted RBP11.71□□□□□ -0.54
SCAF11-209ENST00000547018 LMO7DNF2Z398 122 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 SRPX2O60687 465 aaPredicted RBP11.71□□□□□ -0.54
SCAF11-209ENST00000547018 PIAS2O75928 621 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 S1PR1P21453 382 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 TBXA2RP21731 343 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 PPP5CP53041 499 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 OR12D2P58182 307 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 SKP1P63208 163 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 OCLNQ16625 522 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 ELOA3BQ3SY89 546 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 MTFR2Q6P444 385 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 ZNF554Q86TJ5 538 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 ELOA3Q8NG57 546 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 MUTYHQ9UIF7 546 aa11.71□□□□□ -0.54
SCAF11-209ENST00000547018 FRYQ5TBA9 3013 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 PRAMEF2O60811 474 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 SULT1C4O75897 302 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 RORCP51449 518 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 FZD5Q13467 585 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 PRTGQ2VWP7 1150 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 PYDC2Q56P42 97 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 APOOLQ6UXV4 268 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 GJD3Q8N144 294 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 PTP4A1Q93096 173 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 KCTD7Q96MP8 289 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 CDX2Q99626 313 aaPredicted RBP11.7□□□□□ -0.54
SCAF11-209ENST00000547018 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.7□□□□□ -0.54
SCAF11-209ENST00000547018 SEC14L4Q9UDX3 406 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 DIMT1Q9UNQ2 313 aaKnown RBP11.7□□□□□ -0.54
SCAF11-209ENST00000547018 SIT1Q9Y3P8 196 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 PCDHGB6Q9Y5F9 930 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 A0A1W2PR77 199 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 TLCD2A6NGC4 264 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 MCIDASD6RGH6 385 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 SLITRK5O94991 958 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 RHAGQ02094 409 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 CFHR1Q03591 330 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 ARMC4Q5T2S8 1044 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 IDNKQ5T6J7 187 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 C1QL3Q5VWW1 255 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 MARCH3Q86UD3 253 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 KLHL36Q8N4N3 616 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 LINC00471Q8N535 108 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 NEIL3Q8TAT5 605 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 VSTM2LQ96N03 204 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 ALG8Q9BVK2 526 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 ING1Q9UK53 422 aaPredicted RBP11.7□□□□□ -0.54
SCAF11-209ENST00000547018 FAM25AB3EWG3 89 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 FAM25CB3EWG5 89 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 FAM25GB3EWG6 89 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 GPANK1O95872 356 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 HMGN1P05114 100 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 HIST1H1CP16403 213 aaKnown RBP11.7□□□□□ -0.54
SCAF11-209ENST00000547018 AQP2P41181 271 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 RAB25P57735 213 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 ACBD7Q8N6N7 88 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 ZNF511Q8NB15 262 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 C8orf44Q96CB5 159 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 SLC30A2Q9BRI3 323 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 GTPBP2Q9BX10 602 aaKnown RBP11.7□□□□□ -0.54
SCAF11-209ENST00000547018 DNAJB12Q9NXW2 375 aaKnown RBP11.7□□□□□ -0.54
SCAF11-209ENST00000547018 LSM2Q9Y333 95 aaKnown RBP11.7□□□□□ -0.54
SCAF11-209ENST00000547018 KLK4Q9Y5K2 254 aa11.7□□□□□ -0.54
SCAF11-209ENST00000547018 SIRT4Q9Y6E7 314 aaPredicted RBP11.7□□□□□ -0.54
SCAF11-209ENST00000547018 PATE3B3GLJ2 98 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 DOK2O60496 412 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 RAD1O60671 282 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 NKX2-2O95096 273 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 RCBTB2O95199 551 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 E2F1Q01094 437 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 RAB40BQ12829 278 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 DSG2Q14126 1118 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 TOMM34Q15785 309 aaPredicted RBP11.69□□□□□ -0.54
SCAF11-209ENST00000547018 PHF19Q5T6S3 580 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 CELF2-AS1Q8N7Q2 184 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 ZPLD1Q8TCW7 415 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 VMP1Q96GC9 406 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 POU2F3Q9UKI9 436 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 A0A087WV62 115 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 FAM221BA6H8Z2 402 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 FABP12A6NFH5 140 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 TVP23AA6NH52 213 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 IDSB3KWA1 339 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 E9PQ18 207 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 SCDO00767 359 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 WISP1O95388 367 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 NSA2O95478 260 aaKnown RBP11.69□□□□□ -0.54
SCAF11-209ENST00000547018 FCER2P06734 321 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 IL12BP29460 328 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 CSF2RBP32927 897 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 FASLGP48023 281 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 AFF3P51826 1226 aaKnown RBP11.69□□□□□ -0.54
SCAF11-209ENST00000547018 TPTEP56180 551 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 OR6C4Q8NGE1 309 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 MOSPD2Q8NHP6 518 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 CEP76Q8TAP6 659 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 CHPT1Q8WUD6 406 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 CTHRC1Q96CG8 243 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms