RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 ZNF208O43345 1280 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 FMO6PO60774 539 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 RCBTB2O95199 551 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 IL2RAP01589 272 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 CRHP06850 196 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 GKN3PP0CG01 181 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 AQP1P29972 269 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 KDELR2P33947 212 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 POLR2HP52434 150 aaKnown RBP13.01□□□□□ -0.33
DDX54-203ENST00000546869 ZNF136P52737 540 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 CRYBA2P53672 197 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 DUSP7Q16829 419 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 EEF1A1P5Q5VTE0 462 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 UBQLNLQ8IYU4 475 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 PGAM4Q8N0Y7 254 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 TNIP2Q8NFZ5 429 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 OR2V1Q8NHB1 315 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 LILRB4Q8NHJ6 448 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 TAMM41Q96BW9 452 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 ALG2Q9H553 416 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 PIF1Q9H611 641 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 C12orf10Q9HB07 376 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 TIGARQ9NQ88 270 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 CTPS2Q9NRF8 586 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 ZNF629Q9UEG4 869 aaPredicted RBP13.01□□□□□ -0.33
DDX54-203ENST00000546869 CHRNA9Q9UGM1 479 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 OSGIN1Q9UJX0 560 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 RNF6Q9Y252 685 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 DOPEY1Q5JWR5 2465 aa13.01□□□□□ -0.33
DDX54-203ENST00000546869 A0A0G2JNJ9 132 aa13□□□□□ -0.33
DDX54-203ENST00000546869 H0YC42 278 aa13□□□□□ -0.33
DDX54-203ENST00000546869 EIF1AYO14602 144 aaKnown RBP13□□□□□ -0.33
DDX54-203ENST00000546869 SEC14L5O43304 696 aa13□□□□□ -0.33
DDX54-203ENST00000546869 IL18BPO95998 194 aa13□□□□□ -0.33
DDX54-203ENST00000546869 RNF224P0DH78 156 aa13□□□□□ -0.33
DDX54-203ENST00000546869 PRG2P13727 222 aa13□□□□□ -0.33
DDX54-203ENST00000546869 CD247P20963 164 aa13□□□□□ -0.33
DDX54-203ENST00000546869 CALB2P22676 271 aa13□□□□□ -0.33
DDX54-203ENST00000546869 TACR3P29371 465 aa13□□□□□ -0.33
DDX54-203ENST00000546869 CHRNB4P30926 498 aa13□□□□□ -0.33
DDX54-203ENST00000546869 GSK3BP49841 420 aa13□□□□□ -0.33
DDX54-203ENST00000546869 TPD52P55327 224 aaPredicted RBP13□□□□□ -0.33
DDX54-203ENST00000546869 CARD18P57730 90 aa13□□□□□ -0.33
DDX54-203ENST00000546869 FXNQ16595 210 aa13□□□□□ -0.33
DDX54-203ENST00000546869 NRF1Q16656 503 aa13□□□□□ -0.33
DDX54-203ENST00000546869 TMEM176BQ3YBM2 270 aaPredicted RBP13□□□□□ -0.33
DDX54-203ENST00000546869 GLIPR1L2Q4G1C9 344 aa13□□□□□ -0.33
DDX54-203ENST00000546869 OR2A2Q6IF42 318 aa13□□□□□ -0.33
DDX54-203ENST00000546869 C16orf89Q6UX73 402 aa13□□□□□ -0.33
DDX54-203ENST00000546869 NCCRP1Q6ZVX7 275 aaPredicted RBP13□□□□□ -0.33
DDX54-203ENST00000546869 COMTD1Q86VU5 262 aa13□□□□□ -0.33
DDX54-203ENST00000546869 OR10D3Q8NH80 312 aa13□□□□□ -0.33
DDX54-203ENST00000546869 SLC26A7Q8TE54 656 aa13□□□□□ -0.33
DDX54-203ENST00000546869 OSTF1Q92882 214 aa13□□□□□ -0.33
DDX54-203ENST00000546869 CPNE4Q96A23 557 aaPredicted RBP13□□□□□ -0.33
DDX54-203ENST00000546869 ARHGDIGQ99819 225 aa13□□□□□ -0.33
DDX54-203ENST00000546869 TRIM2Q9C040 744 aa13□□□□□ -0.33
DDX54-203ENST00000546869 Q9UFV3 132 aa13□□□□□ -0.33
DDX54-203ENST00000546869 TESQ9UGI8 421 aaKnown RBP13□□□□□ -0.33
DDX54-203ENST00000546869 SLC13A4Q9UKG4 626 aa13□□□□□ -0.33
DDX54-203ENST00000546869 BAG5Q9UL15 447 aa13□□□□□ -0.33
DDX54-203ENST00000546869 USP22Q9UPT9 525 aa13□□□□□ -0.33
DDX54-203ENST00000546869 KLF2Q9Y5W3 355 aaPredicted RBP13□□□□□ -0.33
DDX54-203ENST00000546869 LRRK2Q5S007 2527 aa13□□□□□ -0.33
DDX54-203ENST00000546869 SLC22A20A6NK97 555 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 KDM4EB2RXH2 506 aaPredicted RBP12.99□□□□□ -0.33
DDX54-203ENST00000546869 CLDN14O95500 239 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 FESP07332 822 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 T-ENOLP0DO92 83 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 FCGR2AP12318 317 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 HSD17B1P14061 328 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 HTR1EP28566 365 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 CPA2P48052 419 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 RAC3P60763 192 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 SGCBQ16585 318 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 SYT14P1Q58G82 188 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 HBMQ6B0K9 141 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 C6orf89Q6UWU4 347 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 TMPPEQ6ZT21 453 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 TRPM8Q7Z2W7 1104 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 C9orf106Q8NAJ2 232 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 SMYD1Q8NB12 490 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 GPR32P1Q8NGA4 272 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 OR10Q1Q8NGQ4 319 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 DNAJA4Q8WW22 397 aaPredicted RBP12.99□□□□□ -0.33
DDX54-203ENST00000546869 SDCCAG3Q96C92 435 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 ZNF559Q9BR84 538 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 POTEKPQ9BYX7 375 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 C1orf21Q9H246 121 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 RNF122Q9H9V4 155 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 CD300AQ9UGN4 299 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 MCTS1Q9ULC4 181 aaKnown RBP12.99□□□□□ -0.33
DDX54-203ENST00000546869 TRAPPC4Q9Y296 219 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 HDGFL3Q9Y3E1 203 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 HEATR5AQ86XA9 2040 aa12.99□□□□□ -0.33
DDX54-203ENST00000546869 MYO7BQ6PIF6 2116 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 NCOA6Q14686 2063 aaPredicted RBP12.98□□□□□ -0.33
DDX54-203ENST00000546869 TMED7-TICAM2A0A0A6YYA0 188 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 TMEM229AB2RXF0 380 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 TNFSF11O14788 317 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms