RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 MALRD1Q5VYJ5 2156 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 SMIM23A6NLE4 172 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 TMEM114B3SHH9 223 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 H3BNH8 94 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 H7C417 338 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 LYPLA1O75608 230 aaPredicted RBP11.04□□□□□ -0.64
COPS7A-221ENST00000546229 CHEK2O96017 543 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 KRT16P08779 473 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 GGT1P19440 569 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 TTKP33981 857 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 H3F3AP84243 136 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 VLDLRP98155 873 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 LOXL1Q08397 574 aaPredicted RBP11.04□□□□□ -0.64
COPS7A-221ENST00000546229 NRF1Q16656 503 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 ARHGAP11BQ3KRB8 267 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 IL23RQ5VWK5 629 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 FBXW9Q5XUX1 488 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 EMBQ6PCB8 327 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 GALNT5Q7Z7M9 940 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 TMCO5AQ8N6Q1 288 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 CCDC63Q8NA47 563 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 MOAP1Q96BY2 351 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 ARL5BQ96KC2 179 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 CACNG6Q9BXT2 260 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 SAP130Q9H0E3 1048 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 YAE1D1Q9NRH1 226 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 TMEM160Q9NX00 188 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 ZDHHC2Q9UIJ5 367 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 MID2Q9UJV3 735 aa11.04□□□□□ -0.64
COPS7A-221ENST00000546229 FAF1Q9UNN5 650 aaPredicted RBP11.04□□□□□ -0.64
COPS7A-221ENST00000546229 RNF212BA8MTL3 300 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 A8MV72 311 aaPredicted RBP11.03□□□□□ -0.64
COPS7A-221ENST00000546229 GTPBP1O00178 669 aaKnown RBP11.03□□□□□ -0.64
COPS7A-221ENST00000546229 ANKRD28O15084 1053 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 SSX4O60224 188 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 RAD51DO75771 328 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 IGHV3-9P01782 118 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 G6PDP11413 515 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 PRPS1L1P21108 318 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 CD40P25942 277 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 MAPK1P28482 360 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 CCR4P51679 360 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 PHC1P78364 1004 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 GABRA6Q16445 453 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 TYW3Q6IPR3 259 aaKnown RBP11.03□□□□□ -0.64
COPS7A-221ENST00000546229 PODNL1Q6PEZ8 512 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 FRRS1Q6ZNA5 592 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 SSX8Q7RTT4 187 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 MTDHQ86UE4 582 aaKnown RBP11.03□□□□□ -0.64
COPS7A-221ENST00000546229 NATD1Q8N6N6 113 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 ZNF525Q8N782 197 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 ZNF614Q8N883 585 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 WDR31Q8NA23 367 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 RFWD2Q8NHY2 731 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 AGR3Q8TD06 166 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 SLC25A43Q8WUT9 341 aaPredicted RBP11.03□□□□□ -0.64
COPS7A-221ENST00000546229 OIT3Q8WWZ8 545 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 CHMP6Q96FZ7 201 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 HS6ST2Q96MM7 605 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 MUS81Q96NY9 551 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 DHRS9Q9BPW9 319 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 DUSP26Q9BV47 211 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 CTPS2Q9NRF8 586 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 CBLN4Q9NTU7 201 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 ATAD3AQ9NVI7 634 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 LGALS13Q9UHV8 139 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 MKLN1Q9UL63 735 aa11.03□□□□□ -0.64
COPS7A-221ENST00000546229 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.03□□□□□ -0.646e-24■■■■■ 88.5
COPS7A-221ENST00000546229 RNF103-CHMP3A0A140T963 221 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 PHF1O43189 567 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-221ENST00000546229 DNPH1O43598 174 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 STX11O75558 287 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 SKAP2O75563 359 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-221ENST00000546229 SLU7O95391 586 aaKnown RBP11.02□□□□□ -0.65
COPS7A-221ENST00000546229 PMS2P2O95744 297 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 AK1P00568 194 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 UBTFL6P0CB48 400 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-221ENST00000546229 FAM157CP0CG43 387 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 CREB1P16220 341 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 DDX5P17844 614 aaKnown RBP11.02□□□□□ -0.65
COPS7A-221ENST00000546229 ETV4P43268 484 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 CLDN8P56748 225 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 MERTKQ12866 999 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 GPR68Q15743 365 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 LSM12Q3MHD2 195 aaKnown RBP11.02□□□□□ -0.65
COPS7A-221ENST00000546229 ATP6AP1LQ52LC2 224 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 AGAP6Q5VW22 663 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 OR4F3Q6IEY1 312 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 C6orf120Q7Z4R8 191 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 ADGRG3Q86Y34 549 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 FNDC5Q8NAU1 212 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 OR8J2Q8NGG1 315 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 OR2W6PQ8NHA6 318 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 C10orf105Q8TEF2 133 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 UBLCP1Q8WVY7 318 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-221ENST00000546229 HTRA1Q92743 480 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 ZG16BQ96DA0 208 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 RADILQ96JH8 1075 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 TNFRSF13CQ96RJ3 184 aa11.02□□□□□ -0.65
COPS7A-221ENST00000546229 OR11A1Q9GZK7 315 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms