RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 GP6Q9HCN6 339 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 SERINC1Q9NRX5 453 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 CORO2BQ9UQ03 480 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 IFT52Q9Y366 437 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 CCDC168Q8NDH2 2452 aa10.63□□□□□ -0.71
YBX3-217ENST00000546164 CFAP73A6NFT4 308 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 EVPLLA8MZ36 301 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 ANGPT2O15123 496 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 PGM3O95394 542 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 ARAFP10398 606 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 UQCRBP14927 111 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 ETS2P15036 469 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 SLC7A1P30825 629 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 RYKP34925 604 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 KIR2DL3P43628 341 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 HTR3AP46098 478 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 ARFIP2P53365 341 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 RAC3P60763 192 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 TLE4Q04727 773 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 MERTKQ12866 999 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 EPS8Q12929 822 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 LARS2Q15031 903 aaKnown RBP10.62□□□□□ -0.71
YBX3-217ENST00000546164 RUNDC3AQ59EK9 446 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 RPS26P11Q5JNZ5 115 aaPredicted RBP10.62□□□□□ -0.71
YBX3-217ENST00000546164 GCNT6Q5T4J0 391 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 GTF2IRD2BQ6EKJ0 949 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 ZNF836Q6ZNA1 936 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 BTLAQ7Z6A9 289 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 DHDDSQ86SQ9 333 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 LUZP2Q86TE4 346 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 GTF2IRD2Q86UP8 949 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 RETREG3Q86VR2 466 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 VRK2Q86Y07 508 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 C10orf111Q8N326 155 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 CNEP1R1Q8N9A8 125 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 OR6K3Q8NGY3 331 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 ZNF563Q8TA94 476 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 RNF128Q8TEB7 428 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 FAM222BQ8WU58 562 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 MAL2Q969L2 176 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 SLC35B4Q969S0 331 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 ZNF317Q96PQ6 595 aaPredicted RBP10.62□□□□□ -0.71
YBX3-217ENST00000546164 CPPED1Q9BRF8 314 aaPredicted RBP10.62□□□□□ -0.71
YBX3-217ENST00000546164 SPATA9Q9BWV2 254 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 SRXN1Q9BYN0 137 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 IKZF5Q9H5V7 419 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 TMEM38AQ9H6F2 299 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 GALNT8Q9NY28 637 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 KLHL14Q9P2G3 628 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.62□□□□□ -0.71
YBX3-217ENST00000546164 CHRNA9Q9UGM1 479 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 ZNF443Q9Y2A4 671 aaPredicted RBP10.62□□□□□ -0.71
YBX3-217ENST00000546164 EMC9Q9Y3B6 208 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 CHST2Q9Y4C5 530 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 SPIN1Q9Y657 262 aaPredicted RBP10.62□□□□□ -0.71
YBX3-217ENST00000546164 PDZD2O15018 2839 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 CSMD2Q7Z408 3487 aa10.62□□□□□ -0.71
YBX3-217ENST00000546164 FAM221AA4D161 298 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 AP3D1O14617 1153 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 ADSLP30566 484 aaPredicted RBP10.61□□□□□ -0.71
YBX3-217ENST00000546164 SLC1A3P43003 542 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 CPA2P48052 419 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 IDH2P48735 452 aaKnown RBP10.61□□□□□ -0.71
YBX3-217ENST00000546164 CLK1P49759 484 aaKnown RBP10.61□□□□□ -0.71
YBX3-217ENST00000546164 MAP2K6P52564 334 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 SIRPAP78324 504 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 CDK6Q00534 326 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 MYBPHQ13203 477 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 RNPS1Q15287 305 aaKnown RBP10.61□□□□□ -0.71
YBX3-217ENST00000546164 SYT14P1Q58G82 188 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 COQ5Q5HYK3 327 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 ZNF474Q6S9Z5 364 aaPredicted RBP10.61□□□□□ -0.71
YBX3-217ENST00000546164 TMPPEQ6ZT21 453 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 ADGRG3Q86Y34 549 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 SLC43A2Q8N370 569 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 REXO5Q96IC2 774 aaKnown RBP10.61□□□□□ -0.71
YBX3-217ENST00000546164 ANKRD27Q96NW4 1050 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 CGREF1Q99674 301 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 ZNF559Q9BR84 538 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 ARMC7Q9H6L4 198 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 CACYBPQ9HB71 228 aaKnown RBP10.61□□□□□ -0.71
YBX3-217ENST00000546164 SAR1AQ9NR31 198 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 PLSCR4Q9NRQ2 329 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 RLIMQ9NVW2 624 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 CRIM1Q9NZV1 1036 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 ZNF232Q9UNY5 417 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 ABCA4P78363 2273 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 AKAP9Q99996 3911 aa10.61□□□□□ -0.71
YBX3-217ENST00000546164 A0A1W2PNR3 127 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 TUBAL3A6NHL2 446 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 C5orf58C9J3I9 102 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 SLC22A2O15244 555 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 ZNF208O43345 1280 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 DNPH1O43598 174 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 SMNDC1O75940 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
YBX3-217ENST00000546164 PLGP00747 810 aaPredicted RBP10.6□□□□□ -0.71
YBX3-217ENST00000546164 PRKAR1BP31321 381 aa10.6□□□□□ -0.71
YBX3-217ENST00000546164 ACAA2P42765 397 aaKnown RBP10.6□□□□□ -0.71
YBX3-217ENST00000546164 POLR2HP52434 150 aaKnown RBP10.6□□□□□ -0.71
YBX3-217ENST00000546164 CTBP2P56545 445 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms