RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 CXCR1P25024 350 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 MERTKQ12866 999 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 SELENBP1Q13228 472 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 ELOA3BQ3SY89 546 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 C3orf33Q6P1S2 294 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 RRM2BQ7LG56 351 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 LILRA2Q8N149 483 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 PACRGLQ8N7B6 248 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 ELOA3Q8NG57 546 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 OR4C15Q8NGM1 316 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 OR6S1Q8NH40 331 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 STK35Q8TDR2 534 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 ALPK1Q96QP1 1244 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 KLHL4Q9C0H6 718 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 MAN2C1Q9NTJ4 1040 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 ENOPH1Q9UHY7 261 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 FBXL2Q9UKC9 423 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 TESMINQ9Y4I5 508 aa14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 PRRC2CQ9Y520 2896 aaKnown RBP14.53□□□□□ -0.08
PRPF40A-212ENST00000545856 GJE1A6NN92 205 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 H0Y3Z8 333 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 RASAL1O95294 804 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 BAG2O95816 211 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 F10P00742 488 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 CRYABP02511 175 aaKnown RBP14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 MT-ND1P03886 318 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 CHMP24386 653 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 MST1P26927 711 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 PLGLB1Q02325 96 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 MFSD13AQ14CX5 517 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 MICAQ29983 383 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 LINC00303Q3SY05 128 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 RBMXL3Q8N7X1 1067 aaKnown RBP14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 SLC7A13Q8TCU3 470 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 JSRP1Q96MG2 331 aaPredicted RBP14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 GNRHR2Q96P88 292 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 PKP2Q99959 881 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 FUZQ9BT04 418 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 VCXQ9H320 206 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 ZDHHC11Q9H8X9 412 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 NTN4Q9HB63 628 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 KLHL1Q9NR64 748 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 SLC7A7Q9UM01 511 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 TP53TG5Q9Y2B4 290 aa14.52□□□□□ -0.08
PRPF40A-212ENST00000545856 EPG5Q9HCE0 2579 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 NCKAP5O14513 1909 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 A0A0G2JMM0 328 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 A0A1W2PPB8 328 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 A0A1W2PRS3 328 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 SH3PXD2BA1X283 911 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 A8MVM7 634 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 KIR3DP1A8MWS1 328 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 J3KTA2 159 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 OR2T1O43869 369 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 CCNB2O95067 398 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 LYPD3O95274 346 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 HPRP00739 348 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 ANXA8P13928 327 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 ZNF24P17028 368 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 HK1P19367 917 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 GDF1P27539 372 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 TACR3P29371 465 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 GPR85P60893 370 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 HOXC5Q00444 222 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 ANKDD1AQ495B1 522 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 FGD3Q5JSP0 725 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 OR5M10Q6IEU7 315 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 HMBOX1Q6NT76 420 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 TTC33Q6PID6 262 aaPredicted RBP14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 MBOAT2Q6ZWT7 520 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 TMEM239Q8WW34 195 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 PRSS27Q9BQR3 290 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 POTEKPQ9BYX7 375 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 CHRNA9Q9UGM1 479 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 OSGIN1Q9UJX0 560 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 MED31Q9Y3C7 131 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 DNAJC13O75165 2243 aa14.51□□□□□ -0.09
PRPF40A-212ENST00000545856 TMED7-TICAM2A0A0A6YYA0 188 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 C2orf72A6NCS6 295 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 B4DXG7 233 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 G3V2T6 193 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 DNPH1O43598 174 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 HCN1O60741 890 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 FZD7O75084 574 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 DIRAS1O95057 198 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 ADAP00813 363 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 ZNF23P17027 643 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 YAP1P46937 504 aaKnown RBP14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 RNF144AP50876 292 aaPredicted RBP14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 CTBP2P56545 445 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 FOXF1Q12946 379 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 RFX4Q33E94 735 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 NHSL2Q5HYW2 709 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 ARSKQ6UWY0 536 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 TSPYL5Q86VY4 417 aaPredicted RBP14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 CDK20Q8IZL9 346 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 SLC43A2Q8N370 569 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 TMEM251Q8N6I4 163 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 PIGXQ8TBF5 258 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms