RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 TUBAL3A6NHL2 446 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 TRPC5OSA6NMA1 111 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 NPIPB9F8W1W9 429 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 SLCO1B7G3V0H7 640 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 H3BNH8 94 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 SDHDO14521 159 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 HDAC3O15379 428 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 SEC14L5O43304 696 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 SCN2BO60939 215 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 AGR2O95994 175 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 GUSBP08236 651 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 ME2P23368 584 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 PSMA4P25789 261 aaKnown RBP6.89□□□□□ -1.31
SNHG1-223ENST00000545440 EIF1P41567 113 aaKnown RBP6.89□□□□□ -1.31
SNHG1-223ENST00000545440 CPA2P48052 419 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 AGFG1P52594 562 aaKnown RBP6.89□□□□□ -1.31
SNHG1-223ENST00000545440 SUCLG1P53597 346 aaKnown RBP6.89□□□□□ -1.31
SNHG1-223ENST00000545440 CLDN20P56880 219 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF117Q03924 483 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 PON3Q15166 354 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 PGS1Q32NB8 556 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 ANXA8L1Q5VT79 327 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 ATG16L1Q676U5 607 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 PLXDC2Q6UX71 529 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 WDR75Q8IWA0 830 aaKnown RBP6.89□□□□□ -1.31
SNHG1-223ENST00000545440 CLECL1Q8IZS7 167 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF610Q8N9Z0 462 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 GATSQ8NAP1 163 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 CHDHQ8NE62 594 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-223ENST00000545440 VPS37AQ8NEZ2 397 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 OR5D16Q8NGK9 328 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 OR4A15Q8NGL6 344 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 OR5M1Q8NGP8 315 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 B4GALNT2Q8NHY0 566 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 MIPOL1Q8TD10 442 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 PAIP2Q9BPZ3 127 aaKnown RBP6.89□□□□□ -1.31
SNHG1-223ENST00000545440 RBM24Q9BX46 236 aaKnown RBP6.89□□□□□ -1.31
SNHG1-223ENST00000545440 PINK1Q9BXM7 581 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 NMUR2Q9GZQ4 415 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 SERHL2Q9H4I8 314 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 TMBIM4Q9HC24 238 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 MED17Q9NVC6 651 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 PNPOQ9NVS9 261 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 AIG1Q9NVV5 245 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 GALNT8Q9NY28 637 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 NKIRAS1Q9NYS0 192 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 H2AFY2Q9P0M6 372 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-223ENST00000545440 ICAM5Q9UMF0 924 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 PCDHGB4Q9UN71 923 aa6.89□□□□□ -1.31
SNHG1-223ENST00000545440 PRSS51A0A1B0GVH4 220 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 A6NNC1 897 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 A8MXE2 369 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 H0YC42 278 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 KLF11O14901 512 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 ADAMDEC1O15204 470 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 GMFGO60234 142 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 STX11O75558 287 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 ALDOCP09972 364 aaKnown RBP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 LINGO3P0C6S8 592 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 MATN1P21941 496 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 UQCRC2P22695 453 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 S100A3P33764 101 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 CPOXP36551 454 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 KHKP50053 298 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 P2RX1P51575 399 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 ATP12AP54707 1039 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 TPD52P55327 224 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 MAGOHP61326 146 aaKnown RBP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 ROM1Q03395 351 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 LRRC74AQ0VAA2 488 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 DBPQ10586 325 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 SNTB1Q13884 538 aaKnown RBP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 CASP8Q14790 479 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 DAZAP2Q15038 168 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 GUSBP1Q15486 140 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 CTU2Q2VPK5 515 aaKnown RBP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 ARHGAP11BQ3KRB8 267 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 FAM174BQ3ZCQ3 159 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 KLHL26Q53HC5 615 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 SPANXN4Q5MJ08 99 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 SAXO2Q658L1 398 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 HEPHL1Q6MZM0 1159 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 TEPPQ6URK8 271 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 ESPNLQ6ZVH7 1005 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 C6orf120Q7Z4R8 191 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 SPATA19Q7Z5L4 167 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 LUZP2Q86TE4 346 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 ANKRD46Q86W74 232 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 CNEP1R1Q8N9A8 125 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 TOR1AIP2Q8NFQ8 470 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 FNDC9Q8TBE3 224 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 MGARPQ8TDB4 240 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 SMPDL3BQ92485 455 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 FIG4Q92562 907 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 NEURL3Q96EH8 262 aa6.88□□□□□ -1.31
SNHG1-223ENST00000545440 SH3YL1Q96HL8 342 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF845Q96IR2 970 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 MAELQ96JY0 434 aaKnown RBP6.88□□□□□ -1.31
SNHG1-223ENST00000545440 ADGRG7Q96K78 797 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms