RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 LAT2Q9GZY6 243 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 KCNF1Q9H3M0 494 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 PLK3Q9H4B4 646 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 RRAGDQ9NQL2 400 aaPredicted RBP12.84□□□□□ -0.35
RTN3-214ENST00000545432 METRNQ9UJH8 293 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 TRAF6Q9Y4K3 522 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 TRRAPQ9Y4A5 3859 aa12.84□□□□□ -0.35
RTN3-214ENST00000545432 LRP5LA4QPB2 252 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 GTPBP1O00178 669 aaKnown RBP12.83□□□□□ -0.36
RTN3-214ENST00000545432 SULT2B1O00204 365 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 ZNF264O43296 627 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 IL2RGP31785 369 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 KHKP50053 298 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 PPOXP50336 477 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 CHN2P52757 468 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 DVL1P1P54792 670 aaPredicted RBP12.83□□□□□ -0.36
RTN3-214ENST00000545432 SESN3P58005 492 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 CBFBQ13951 182 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 NDUFAF6Q330K2 333 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 SYT14P1Q58G82 188 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 RNF165Q6ZSG1 346 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 UBE2J2Q8N2K1 259 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 OR52E4Q8NGH9 312 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 SLC25A43Q8WUT9 341 aaPredicted RBP12.83□□□□□ -0.36
RTN3-214ENST00000545432 CDS1Q92903 461 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 C3orf49Q96BT1 292 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 MTERF3Q96E29 417 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 CCT7Q99832 543 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 MID1IP1Q9NPA3 183 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 ACER3Q9NUN7 267 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 FBXO9Q9UK97 447 aaPredicted RBP12.83□□□□□ -0.36
RTN3-214ENST00000545432 MOKQ9UQ07 419 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 KCNE3Q9Y6H6 103 aa12.83□□□□□ -0.36
RTN3-214ENST00000545432 NPIPA5A0A0B4J1W7 369 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 NPIPA7E9PJI5 369 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 MRPL33O75394 65 aaKnown RBP12.82□□□□□ -0.36
RTN3-214ENST00000545432 PMS2P2O95744 297 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 SNRPAP09012 282 aaKnown RBP12.82□□□□□ -0.36
RTN3-214ENST00000545432 NPIPA8P0DM63 369 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 ATP6V1C1P21283 382 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 PAX7P23759 505 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 FKBP2P26885 142 aaKnown RBP12.82□□□□□ -0.36
RTN3-214ENST00000545432 SERPINF1P36955 418 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 SRP14P37108 136 aaKnown RBP12.82□□□□□ -0.36
RTN3-214ENST00000545432 CLK1P49759 484 aaKnown RBP12.82□□□□□ -0.36
RTN3-214ENST00000545432 NAA20P61599 178 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 SNRPD2P62316 118 aaKnown RBP12.82□□□□□ -0.36
RTN3-214ENST00000545432 C2orf54Q08AI8 447 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 SKP2Q13309 424 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 RIN1Q13671 783 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 LASP1Q14847 261 aaKnown RBP12.82□□□□□ -0.36
RTN3-214ENST00000545432 ZNF141Q15928 474 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 IMPG1Q17R60 797 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 PRR31Q5SQ13 230 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 TEX35Q5T0J7 233 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 DCST2Q5T1A1 773 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 ANKS4BQ8N8V4 417 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 PIGXQ8TBF5 258 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 FAM216AQ8WUB2 273 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 PPCDCQ96CD2 204 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 OTUB1Q96FW1 271 aaPredicted RBP12.82□□□□□ -0.36
RTN3-214ENST00000545432 NMUR2Q9GZQ4 415 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 QRSL1Q9H0R6 528 aaKnown RBP12.82□□□□□ -0.36
RTN3-214ENST00000545432 TNFRSF12AQ9NP84 129 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 OBP2BQ9NPH6 170 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 SERINC1Q9NRX5 453 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 GPATCH2Q9NW75 528 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 HDGFL3Q9Y3E1 203 aa12.82□□□□□ -0.36
RTN3-214ENST00000545432 FAM157AC9JC47 383 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 SEC22BO75396 215 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 UBL4AP11441 157 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 SDC1P18827 310 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 PCMT1P22061 227 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 IDH3GP51553 393 aaPredicted RBP12.81□□□□□ -0.36
RTN3-214ENST00000545432 ARFIP2P53365 341 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 PRPS1P60891 318 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 ADIPOQQ15848 244 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 C3orf36Q3SXR2 165 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 USP43Q70EL4 1123 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 ZNF572Q7Z3I7 529 aaPredicted RBP12.81□□□□□ -0.36
RTN3-214ENST00000545432 ZNF786Q8N393 782 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 ARL5BQ96KC2 179 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 THUMPD3Q9BV44 507 aaKnown RBP12.81□□□□□ -0.36
RTN3-214ENST00000545432 CCDC106Q9BWC9 280 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 ACTRT3Q9BYD9 372 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 CDC42EP4Q9H3Q1 356 aaKnown RBP12.81□□□□□ -0.36
RTN3-214ENST00000545432 SLC7A10Q9NS82 523 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 CA10Q9NS85 328 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 ZCCHC3Q9NUD5 404 aaKnown RBP12.81□□□□□ -0.36
RTN3-214ENST00000545432 PARPBPQ9NWS1 579 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 C1orf109Q9NX04 203 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 CRNNQ9UBG3 495 aaPredicted RBP12.81□□□□□ -0.36
RTN3-214ENST00000545432 KCNE5Q9UJ90 142 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 TRAPPC4Q9Y296 219 aa12.81□□□□□ -0.36
RTN3-214ENST00000545432 SERINC4A6NH21 518 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 IGFBP1P08833 259 aaPredicted RBP12.8□□□□□ -0.36
RTN3-214ENST00000545432 PGCP20142 388 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 MPGP29372 298 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 APOBEC1P41238 236 aaKnown RBP12.8□□□□□ -0.36
RTN3-214ENST00000545432 RNF144AP50876 292 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms