RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 ATP4BP51164 291 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CCR4P51679 360 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 SUCLG1P53597 346 aaKnown RBP6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CLDN15P56746 228 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CLDN20P56880 219 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 TFF3Q07654 80 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CBFBQ13951 182 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 GNA13Q14344 377 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 FGFBP1Q14512 234 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 C21orf62-AS1Q17RA5 79 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 TMEM44Q2T9K0 475 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 PLPPR5Q32ZL2 321 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 TIGD2Q4W5G0 525 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 C6orf10Q5SRN2 563 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.63□□□□□ -1.35
CPSF7-224ENST00000544990 AP1ARQ63HQ0 302 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 TYW3Q6IPR3 259 aaKnown RBP6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CBLN3Q6UW01 205 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 LRRC74BQ6ZQY2 392 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 HEATR5AQ86XA9 2040 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 KIF18BQ86Y91 864 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 METTL25Q8N6Q8 603 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 C9orf106Q8NAJ2 232 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 ACBD4Q8NC06 268 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 RELL2Q8NC24 303 aaPredicted RBP6.63□□□□□ -1.35
CPSF7-224ENST00000544990 NAXEQ8NCW5 288 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 OR9I1Q8NGQ6 314 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 OR5W2Q8NH69 310 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 RFWD2Q8NHY2 731 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 GPR119Q8TDV5 335 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 ZFP90Q8TF47 636 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 STON2Q8WXE9 905 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 TMEM234Q8WY98 164 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 PMM1Q92871 262 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 NINJ1Q92982 152 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 INTS12Q96CB8 462 aaKnown RBP6.63□□□□□ -1.35
CPSF7-224ENST00000544990 ARSGQ96EG1 525 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 C14orf79Q96F83 325 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 MRGPRX4Q96LA9 322 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 RNF145Q96MT1 663 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 TRNT1Q96Q11 434 aaKnown RBP6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CDADC1Q9BWV3 514 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 PINK1Q9BXM7 581 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 PRRG4Q9BZD6 226 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 LAT2Q9GZY6 243 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 PIGMQ9H3S5 423 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 RAD21L1Q9H4I0 556 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 MTHFD2LQ9H903 347 aaPredicted RBP6.63□□□□□ -1.35
CPSF7-224ENST00000544990 TPT1P8Q9HAU6 139 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 TIGARQ9NQ88 270 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.63□□□□□ -1.35
CPSF7-224ENST00000544990 PKDREJQ9NTG1 2253 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 TMEM45AQ9NWC5 275 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CALML5Q9NZT1 146 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CCDC167Q9P0B6 97 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 CLCF1Q9UBD9 225 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 ICAM5Q9UMF0 924 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 SLC35A3Q9Y2D2 325 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF175Q9Y473 711 aa6.63□□□□□ -1.35
CPSF7-224ENST00000544990 UTP20O75691 2785 aaKnown RBP6.63□□□□□ -1.35
CPSF7-224ENST00000544990 UQCRHLA0A096LP55 91 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 EEF1E1-BLOC1S5C9J1V9 151 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 EEF1E1O43324 174 aaKnown RBP6.62□□□□□ -1.35
CPSF7-224ENST00000544990 KIAA0513O60268 411 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 EDF1O60869 148 aaKnown RBP6.62□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF205O95201 554 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 SYNGR4O95473 234 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 H6PDO95479 791 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 TGM6O95932 706 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 UBTFL6P0CB48 400 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-224ENST00000544990 IL7RP16871 459 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 IGFBP2P18065 325 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 NAT1P18440 290 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 NCF2P19878 526 aaPredicted RBP6.62□□□□□ -1.35
CPSF7-224ENST00000544990 ELK4P28324 431 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 UQCRC1P31930 480 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 AGFG1P52594 562 aaKnown RBP6.62□□□□□ -1.35
CPSF7-224ENST00000544990 DSTNP60981 165 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 KCNJ10P78508 379 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 CHRNEQ04844 493 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 EGR3Q06889 387 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 SQLEQ14534 574 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 PON3Q15166 354 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 SYPL1Q16563 259 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 FBXL19-AS1Q494R0 122 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 AGKQ53H12 422 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 HBMQ6B0K9 141 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 PPP4R4Q6NUP7 873 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 FRRS1Q6ZNA5 592 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 ESPNLQ6ZVH7 1005 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 CMIPQ8IY22 773 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 PEX5LQ8IYB4 626 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 GCNT2Q8N0V5 402 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 LILRA2Q8N149 483 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 OR10D3Q8NH80 312 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 OR2V1Q8NHB1 315 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF563Q8TA94 476 aa6.62□□□□□ -1.35
CPSF7-224ENST00000544990 PNPT1Q8TCS8 783 aaKnown RBP6.62□□□□□ -1.35
CPSF7-224ENST00000544990 ST8SIA1Q92185 356 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms