RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 UBL4AP11441 157 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 CD99P14209 185 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 ETS2P15036 469 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 NCK1P16333 377 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 KLK2P20151 261 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 TCEA1P23193 301 aaKnown RBP11.24□□□□□ -0.61
ACTN1-206ENST00000544964 PCBP3P57721 371 aaKnown RBP11.24□□□□□ -0.61
ACTN1-206ENST00000544964 KCNJ10P78508 379 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 CEACAM7Q14002 265 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 VEZF1Q14119 521 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 TOMM20Q15388 145 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 ZNF311Q5JNZ3 666 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 CBLN3Q6UW01 205 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 PAMR1Q6UXH9 720 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 EIF3MQ7L2H7 374 aaKnown RBP11.24□□□□□ -0.61
ACTN1-206ENST00000544964 KRT73Q86Y46 540 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 MISPQ8IVT2 679 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 SLC30A8Q8IWU4 369 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 TMCO5AQ8N6Q1 288 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 C9orf106Q8NAJ2 232 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 OR2M3Q8NG83 312 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 FIG4Q92562 907 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 CNOT9Q92600 299 aaKnown RBP11.24□□□□□ -0.61
ACTN1-206ENST00000544964 PMM1Q92871 262 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 TRIB1Q96RU8 372 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 ZNF607Q96SK3 696 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 RSPO3Q9BXY4 272 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-206ENST00000544964 C1orf21Q9H246 121 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 CACYBPQ9HB71 228 aaKnown RBP11.24□□□□□ -0.61
ACTN1-206ENST00000544964 DLL4Q9NR61 685 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 RLIMQ9NVW2 624 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 EGFL7Q9UHF1 273 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 FOXD3Q9UJU5 478 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-206ENST00000544964 ARID1AO14497 2285 aa11.24□□□□□ -0.61
ACTN1-206ENST00000544964 M0QX08 132 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 CXCR6O00574 342 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 GYG2O15488 501 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 ZNF264O43296 627 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 TPST1O60507 370 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 CBR3O75828 277 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 MFN2O95140 757 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 THBS1P07996 1170 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 UBTFL6P0CB48 400 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-206ENST00000544964 NID1P14543 1247 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 PGM1P36871 562 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 CCR4P51679 360 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 AGFG1P52594 562 aaKnown RBP11.23□□□□□ -0.61
ACTN1-206ENST00000544964 EEF1A1P68104 462 aaKnown RBP11.23□□□□□ -0.61
ACTN1-206ENST00000544964 SORDQ00796 357 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 PLAURQ03405 335 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 DMTNQ08495 405 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 FOXD4Q12950 439 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-206ENST00000544964 SKP2Q13309 424 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 LARS2Q15031 903 aaKnown RBP11.23□□□□□ -0.61
ACTN1-206ENST00000544964 DAZAP2Q15038 168 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-206ENST00000544964 GLIPR1L2Q4G1C9 344 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 LIN52Q52LA3 116 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 SAMD4BQ5PRF9 694 aaKnown RBP11.23□□□□□ -0.61
ACTN1-206ENST00000544964 MRPL2Q5T653 305 aaKnown RBP11.23□□□□□ -0.61
ACTN1-206ENST00000544964 INTS11Q5TA45 600 aaKnown RBP11.23□□□□□ -0.61
ACTN1-206ENST00000544964 CCDC121Q6ZUS5 278 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 CCDC80Q76M96 950 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 ADGRE4PQ86SQ3 457 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 PATL1Q86TB9 770 aaKnown RBP11.23□□□□□ -0.61
ACTN1-206ENST00000544964 YRDCQ86U90 279 aaKnown RBP11.23□□□□□ -0.61
ACTN1-206ENST00000544964 COMTD1Q86VU5 262 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 ARMC8Q8IUR7 673 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 CLIP4Q8N3C7 705 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 FADS6Q8N9I5 356 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 SMYD1Q8NB12 490 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 B4GALNT2Q8NHY0 566 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 OIT3Q8WWZ8 545 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 ABTB1Q969K4 478 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-206ENST00000544964 TAMM41Q96BW9 452 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 MBD6Q96DN6 1003 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 CLPTM1LQ96KA5 538 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 ALPK1Q96QP1 1244 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 BTBD10Q9BSF8 475 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 SPATA5L1Q9BVQ7 753 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 OR2B2Q9GZK3 357 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 CD300AQ9UGN4 299 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 DKKL1Q9UK85 242 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 ZNF232Q9UNY5 417 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 SLC35A3Q9Y2D2 325 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 IFT52Q9Y366 437 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 CHST2Q9Y4C5 530 aa11.23□□□□□ -0.61
ACTN1-206ENST00000544964 IGLV3-32A0A0A0MS00 114 aa11.22□□□□□ -0.61
ACTN1-206ENST00000544964 TUBAL3A6NHL2 446 aa11.22□□□□□ -0.61
ACTN1-206ENST00000544964 EEF1E1-BLOC1S5C9J1V9 151 aa11.22□□□□□ -0.61
ACTN1-206ENST00000544964 EEF1E1O43324 174 aaKnown RBP11.22□□□□□ -0.61
ACTN1-206ENST00000544964 FRS3O43559 492 aa11.22□□□□□ -0.61
ACTN1-206ENST00000544964 EIF4E2O60573 245 aaKnown RBP11.22□□□□□ -0.61
ACTN1-206ENST00000544964 DNAJA2O60884 412 aa11.22□□□□□ -0.61
ACTN1-206ENST00000544964 SERPINB7O75635 380 aa11.22□□□□□ -0.61
ACTN1-206ENST00000544964 ATP5HO75947 161 aa11.22□□□□□ -0.61
ACTN1-206ENST00000544964 PDE5AO76074 875 aa11.22□□□□□ -0.61
ACTN1-206ENST00000544964 NUDT14O95848 222 aa11.22□□□□□ -0.61
ACTN1-206ENST00000544964 IL18BPO95998 194 aa11.22□□□□□ -0.61
ACTN1-206ENST00000544964 ACTL6AO96019 429 aa11.22□□□□□ -0.61
ACTN1-206ENST00000544964 FN1P02751 2386 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms