RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 SIX4Q9UIU6 781 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 ACTL7AQ9Y615 435 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 TRAF3IP2O43734 574 aaPredicted RBP18.8■□□□□ 0.6
BPTF-208ENST00000544778 DPM1O60762 260 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 MITFO75030 526 aaPredicted RBP18.8■□□□□ 0.6
BPTF-208ENST00000544778 CEBPBP17676 345 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 RAB11AP62491 216 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 RGNQ15493 299 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 ADAMTS19Q8TE59 1207 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 LINC00597Q9H2U6 94 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 CPNE7Q9UBL6 633 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 UBR1Q8IWV7 1749 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 HPGDSO60760 199 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 OGFOD3Q6PK18 319 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 NDUFAF7Q7L592 441 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 UTP23Q9BRU9 249 aaKnown RBP18.8■□□□□ 0.6
BPTF-208ENST00000544778 HCFC1R1Q9NWW0 138 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 ZNF337Q9Y3M9 751 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 WNT4P56705 351 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 TERB2Q8NHR7 220 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 PEAK1Q9H792 1746 aa18.8■□□□□ 0.6
BPTF-208ENST00000544778 MED6O75586 246 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 GGT1P19440 569 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 SKA3Q8IX90 412 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 DUSP13Q9UII6 198 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 AQP7O14520 342 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 SLC9A3R2Q15599 337 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 PNCKQ6P2M8 343 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 ZNF836Q6ZNA1 936 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 ZBTB8AQ96BR9 441 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 ZNF587Q96SQ5 575 aaPredicted RBP18.79■□□□□ 0.6
BPTF-208ENST00000544778 FCGR2AP12318 317 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 BCKDHBP21953 392 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 MEF2DQ14814 521 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 ARHGAP39Q9C0H5 1083 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 CD300AQ9UGN4 299 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 LOXHD1Q8IVV2 1947 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 IGKV6D-41A0A0C4DH26 115 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 A6NIN4 97 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 APEHP13798 732 aaKnown RBP18.79■□□□□ 0.6
BPTF-208ENST00000544778 ADAMTS6Q9UKP5 1117 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 EMC9Q9Y3B6 208 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 LYRM1O43325 122 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 HNRNPFP52597 415 aaKnown RBP18.79■□□□□ 0.6
BPTF-208ENST00000544778 ERVPABLB-1P60509 514 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 PLA2G7Q13093 441 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 DOK2O60496 412 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 ANKRD13BQ86YJ7 626 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 CMIPQ8IY22 773 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 OR2T35Q8NGX2 323 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 FIBINQ8TAL6 211 aa18.79■□□□□ 0.6
BPTF-208ENST00000544778 CLDN17P56750 224 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 DUSP7Q16829 419 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 LINC00696Q6ZRV3 163 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 TCTN2Q96GX1 697 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 PBX4Q9BYU1 374 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 WIF1Q9Y5W5 379 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 NKX6-3A6NJ46 265 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 BCAT2O15382 392 aaPredicted RBP18.78■□□□□ 0.6
BPTF-208ENST00000544778 OR52E1Q8NGJ3 308 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 OR6C1Q96RD1 312 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 THSD1Q9NS62 852 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 OR6C65A6NJZ3 312 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 EDDM3BP56851 147 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 RIMBP3CA6NJZ7 1639 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 RIMBP3BA6NNM3 1639 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 RIMBP3Q9UFD9 1639 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 SLC31A2O15432 143 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 TXNL1O43396 289 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 OR2T1O43869 369 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 TIMP1P01033 207 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 SERPINF1P36955 418 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 POU3F1Q03052 451 aaPredicted RBP18.78■□□□□ 0.6
BPTF-208ENST00000544778 CMTM2Q8TAZ6 248 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 RLN3Q8WXF3 142 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 ELF4Q99607 663 aaPredicted RBP18.78■□□□□ 0.6
BPTF-208ENST00000544778 DMRT3Q9NQL9 472 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 GPR32O75388 356 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 CD6P30203 668 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 HOXC5Q00444 222 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 PRAMEF20Q5VT98 475 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 TCEAL2Q9H3H9 227 aaPredicted RBP18.78■□□□□ 0.6
BPTF-208ENST00000544778 CA5BQ9Y2D0 317 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 PHLPP1O60346 1717 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 GABRA4P48169 554 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 GABARAPL2P60520 117 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 SLC35A2P78381 396 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 RTP2Q5QGT7 225 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 C12orf49Q9H741 205 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 TXNL4BQ9NX01 149 aaKnown RBP18.78■□□□□ 0.6
BPTF-208ENST00000544778 CBLCQ9ULV8 474 aa18.78■□□□□ 0.6
BPTF-208ENST00000544778 ZNF443Q9Y2A4 671 aaPredicted RBP18.78■□□□□ 0.6
BPTF-208ENST00000544778 PRSS38A1L453 326 aa18.77■□□□□ 0.6
BPTF-208ENST00000544778 TNFRSF4P43489 277 aa18.77■□□□□ 0.6
BPTF-208ENST00000544778 GNB2P62879 340 aa18.77■□□□□ 0.6
BPTF-208ENST00000544778 ACSM3Q53FZ2 586 aa18.77■□□□□ 0.6
BPTF-208ENST00000544778 TCEAL8Q8IYN2 117 aa18.77■□□□□ 0.6
BPTF-208ENST00000544778 OR8J2Q8NGG1 315 aa18.77■□□□□ 0.6
BPTF-208ENST00000544778 OPA3Q9H6K4 179 aa18.77■□□□□ 0.6
BPTF-208ENST00000544778 RETREG1Q9H6L5 497 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms