RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 DSN1Q9H410 356 aa27.7■■■□□ 2.03
CCM2-219ENST00000544363 TEKT2Q9UIF3 430 aa27.7■■■□□ 2.03
CCM2-219ENST00000544363 KLK13Q9UKR3 277 aa27.7■■■□□ 2.03
CCM2-219ENST00000544363 CDC42EP2O14613 210 aa27.7■■■□□ 2.02
CCM2-219ENST00000544363 TNFAIP8O95379 198 aa27.7■■■□□ 2.02
CCM2-219ENST00000544363 ITGA3P26006 1051 aa27.7■■■□□ 2.02
CCM2-219ENST00000544363 NUP107P57740 925 aa27.7■■■□□ 2.02
CCM2-219ENST00000544363 IL5RAQ01344 420 aa27.7■■■□□ 2.02
CCM2-219ENST00000544363 CD47Q08722 323 aa27.7■■■□□ 2.02
CCM2-219ENST00000544363 RTL4Q6ZR62 310 aa27.7■■■□□ 2.02
CCM2-219ENST00000544363 P3H2Q8IVL5 708 aa27.7■■■□□ 2.02
CCM2-219ENST00000544363 FRMD6Q96NE9 622 aa27.7■■■□□ 2.02
CCM2-219ENST00000544363 ANGPTL4Q9BY76 406 aa27.7■■■□□ 2.02
CCM2-219ENST00000544363 SLC19A3Q9BZV2 496 aa27.7■■■□□ 2.02
CCM2-219ENST00000544363 DOCK10Q96BY6 2186 aa27.69■■■□□ 2.02
CCM2-219ENST00000544363 PCNX3Q9H6A9 2034 aa27.69■■■□□ 2.02
CCM2-219ENST00000544363 CCL3P10147 92 aa27.69■■■□□ 2.02
CCM2-219ENST00000544363 SRSF6Q13247 344 aaKnown RBP27.69■■■□□ 2.02
CCM2-219ENST00000544363 PRAMEF20Q5VT98 475 aa27.69■■■□□ 2.02
CCM2-219ENST00000544363 TMEM236Q5W0B7 351 aa27.69■■■□□ 2.02
CCM2-219ENST00000544363 GPALPP1Q8IXQ4 340 aa27.69■■■□□ 2.02
CCM2-219ENST00000544363 BEST3Q8N1M1 668 aa27.69■■■□□ 2.02
CCM2-219ENST00000544363 ZNF786Q8N393 782 aa27.69■■■□□ 2.02
CCM2-219ENST00000544363 FBLIM1Q8WUP2 373 aa27.69■■■□□ 2.02
CCM2-219ENST00000544363 THAP4Q8WY91 577 aa27.69■■■□□ 2.02
CCM2-219ENST00000544363 TMEM43Q9BTV4 400 aa27.69■■■□□ 2.02
CCM2-219ENST00000544363 STMN3Q9NZ72 180 aa27.69■■■□□ 2.02
CCM2-219ENST00000544363 CRYZQ08257 329 aaKnown RBP27.68■■■□□ 2.02
CCM2-219ENST00000544363 FOXC1Q12948 553 aa27.68■■■□□ 2.02
CCM2-219ENST00000544363 CLN3Q13286 438 aa27.68■■■□□ 2.02
CCM2-219ENST00000544363 TMEM234Q8WY98 164 aa27.68■■■□□ 2.02
CCM2-219ENST00000544363 NTNG2Q96CW9 530 aa27.68■■■□□ 2.02
CCM2-219ENST00000544363 OSGIN1Q9UJX0 560 aa27.68■■■□□ 2.02
CCM2-219ENST00000544363 MYRFQ9Y2G1 1151 aa27.68■■■□□ 2.02
CCM2-219ENST00000544363 HRH3Q9Y5N1 445 aa27.68■■■□□ 2.02
CCM2-219ENST00000544363 IGKV1D-42A0A075B6H8 117 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 UNC119BA6NIH7 251 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 EIF4E1BA6NMX2 242 aaKnown RBP27.67■■■□□ 2.02
CCM2-219ENST00000544363 HLCSP50747 726 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 CTU2Q2VPK5 515 aaKnown RBP27.67■■■□□ 2.02
CCM2-219ENST00000544363 GRINAQ7Z429 371 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 CYP4Z2PQ8N1L4 340 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 FAM81AQ8TBF8 368 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 ST8SIA1Q92185 356 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 EGLN3Q9H6Z9 239 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 ZNF696Q9H7X3 374 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 ENO4A6NNW6 628 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 NKX2-8O15522 239 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 POLR2HP52434 150 aaKnown RBP27.67■■■□□ 2.02
CCM2-219ENST00000544363 ABHD17BQ5VST6 288 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 SLX4IPQ5VYV7 408 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 DEPDC4Q8N2C3 294 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 CLDN22Q8N7P3 220 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 PROK2Q9HC23 129 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 IL20Q9NYY1 176 aa27.67■■■□□ 2.02
CCM2-219ENST00000544363 HTR3EA5X5Y0 456 aa27.66■■■□□ 2.02
CCM2-219ENST00000544363 ANKRD33BA6NCL7 494 aa27.66■■■□□ 2.02
CCM2-219ENST00000544363 EFCAB9A8MZ26 197 aa27.66■■■□□ 2.02
CCM2-219ENST00000544363 CXCR1P25024 350 aa27.66■■■□□ 2.02
CCM2-219ENST00000544363 ELK4P28324 431 aa27.66■■■□□ 2.02
CCM2-219ENST00000544363 HTR3AP46098 478 aa27.66■■■□□ 2.02
CCM2-219ENST00000544363 RRADP55042 308 aa27.66■■■□□ 2.02
CCM2-219ENST00000544363 ZNF620Q6ZNG0 422 aa27.66■■■□□ 2.02
CCM2-219ENST00000544363 OR2M3Q8NG83 312 aa27.66■■■□□ 2.02
CCM2-219ENST00000544363 TEX47Q8TBZ9 253 aa27.66■■■□□ 2.02
CCM2-219ENST00000544363 PLA2G12AQ9BZM1 189 aa27.66■■■□□ 2.02
CCM2-219ENST00000544363 ANKRD10Q9NXR5 420 aa27.66■■■□□ 2.02
CCM2-219ENST00000544363 PCDHGB6Q9Y5F9 930 aa27.66■■■□□ 2.02
CCM2-219ENST00000544363 IGF2P01344 180 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 SAGP10523 405 aaPredicted RBP27.65■■■□□ 2.02
CCM2-219ENST00000544363 GIPRP48546 466 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 CYB561P49447 251 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 DLX5P56178 289 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 CDC42P60953 191 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 CDK5R2Q13319 367 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 MAD2L1BPQ15013 274 aaPredicted RBP27.65■■■□□ 2.02
CCM2-219ENST00000544363 INPP5JQ15735 1006 aaPredicted RBP27.65■■■□□ 2.02
CCM2-219ENST00000544363 MDGA2Q7Z553 956 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 ENTHD1Q8IYW4 607 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 FADS6Q8N9I5 356 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 WDSUB1Q8N9V3 476 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 OSTF1Q92882 214 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 UBE2FQ969M7 185 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 SGTBQ96EQ0 304 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 YTHDF1Q9BYJ9 559 aaKnown RBP27.65■■■□□ 2.02
CCM2-219ENST00000544363 ABI3Q9P2A4 366 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 RNF6Q9Y252 685 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 CDH10Q9Y6N8 788 aa27.65■■■□□ 2.02
CCM2-219ENST00000544363 ARGFXA6NJG6 315 aa27.64■■■□□ 2.02
CCM2-219ENST00000544363 PRKCAP17252 672 aa27.64■■■□□ 2.02
CCM2-219ENST00000544363 WT1P19544 449 aaPredicted RBP27.64■■■□□ 2.02
CCM2-219ENST00000544363 CDK5Q00535 292 aa27.64■■■□□ 2.02
CCM2-219ENST00000544363 GINS1Q14691 196 aa27.64■■■□□ 2.02
CCM2-219ENST00000544363 C6orf141Q5SZD1 244 aa27.64■■■□□ 2.02
CCM2-219ENST00000544363 BROXQ5VW32 411 aa27.64■■■□□ 2.02
CCM2-219ENST00000544363 ARSKQ6UWY0 536 aa27.64■■■□□ 2.02
CCM2-219ENST00000544363 OR8D4Q8NGM9 314 aa27.64■■■□□ 2.02
CCM2-219ENST00000544363 SLC25A19Q9HC21 320 aa27.64■■■□□ 2.02
CCM2-219ENST00000544363 TNFSF12-TNFSF13A0A0A6YY99 330 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 PRKAR1AP10644 381 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms