RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SLC10A1Q14973 349 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 RCN1Q15293 331 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 ATP6AP1Q15904 470 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 PLEKHN1Q494U1 663 aaPredicted RBP10.78□□□□□ -0.68
DDB1-223ENST00000543658 WIPI1Q5MNZ9 446 aaPredicted RBP10.78□□□□□ -0.68
DDB1-223ENST00000543658 DCST1Q5T197 706 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 GDF7Q7Z4P5 450 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 YRDCQ86U90 279 aaKnown RBP10.78□□□□□ -0.68
DDB1-223ENST00000543658 EXD3Q8N9H8 876 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 OR52J3Q8NH60 311 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 LRTOMTQ8WZ04 291 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 DDIT4LQ96D03 193 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 WBP1Q96G27 269 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 UBQLN3Q9H347 655 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 ANKRD19PQ9H560 264 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 DCLRE1BQ9H816 532 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 CHRNA9Q9UGM1 479 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 ACAD8Q9UKU7 415 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 SAMHD1Q9Y3Z3 626 aaKnown RBP10.78□□□□□ -0.68
DDB1-223ENST00000543658 HRH3Q9Y5N1 445 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 ACACBO00763 2458 aa10.78□□□□□ -0.68
DDB1-223ENST00000543658 TMED7-TICAM2A0A0A6YYA0 188 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 C7orf72A4D263 438 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 GJE1A6NN92 205 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 H3BML4 177 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 LINC01387J3KSC0 135 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 HPNP05981 417 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 TFPIP10646 304 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 ZNF23P17027 643 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 CCNA2P20248 432 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 FKBP2P26885 142 aaKnown RBP10.77□□□□□ -0.69
DDB1-223ENST00000543658 SLC25A53Q5H9E4 307 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 C5orf46Q6UWT4 87 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 ZNF730Q6ZMV8 503 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 GTPBP8Q8N3Z3 284 aaPredicted RBP10.77□□□□□ -0.69
DDB1-223ENST00000543658 ICA1LQ8NDH6 482 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 ATP6V1C2Q8NEY4 427 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 SLC25A43Q8WUT9 341 aaPredicted RBP10.77□□□□□ -0.69
DDB1-223ENST00000543658 SMPDL3BQ92485 455 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 HS6ST2Q96MM7 605 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 UBL7Q96S82 380 aaPredicted RBP10.77□□□□□ -0.69
DDB1-223ENST00000543658 EPYCQ99645 322 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 DEFB127Q9H1M4 99 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 NMNAT1Q9HAN9 279 aaPredicted RBP10.77□□□□□ -0.69
DDB1-223ENST00000543658 AGPAT4Q9NRZ5 378 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 OSGIN1Q9UJX0 560 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 TMED7Q9Y3B3 224 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 U3KQV3 271 aa10.77□□□□□ -0.69
DDB1-223ENST00000543658 TPRP12270 2363 aaKnown RBP10.77□□□□□ -0.69
DDB1-223ENST00000543658 DNAJC13O75165 2243 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 A0A087WUJ7 227 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 TRGV5A0A0B4J1U4 118 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 A0A1W2PRQ8 180 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 OR2M5A3KFT3 312 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 B4DXG7 233 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 SHISA8B8ZZ34 492 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 NPIPA5E9PKD4 350 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 SUSD5O60279 629 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 HCN1O60741 890 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 CCNB2O95067 398 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 POU3F2P20265 443 aaPredicted RBP10.76□□□□□ -0.69
DDB1-223ENST00000543658 FPR1P21462 350 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 GTF2E2P29084 291 aaKnown RBP10.76□□□□□ -0.69
DDB1-223ENST00000543658 DNAJA1P31689 397 aaKnown RBP10.76□□□□□ -0.69
DDB1-223ENST00000543658 IFNGR2P38484 337 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 RBM34P42696 430 aaKnown RBP10.76□□□□□ -0.69
DDB1-223ENST00000543658 MAP2K6P52564 334 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 DGCR6Q14129 220 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 EXOC3L2Q2M3D2 409 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 PDSS1Q5T2R2 415 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 AMIGO2Q86SJ2 522 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 ZNF605Q86T29 641 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 ATG4DQ86TL0 474 aaPredicted RBP10.76□□□□□ -0.69
DDB1-223ENST00000543658 CDK20Q8IZL9 346 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 PQLC1Q8N2U9 271 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 LINC00471Q8N535 108 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 OR5M1Q8NGP8 315 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 TMEM239Q8WW34 195 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 SLC39A7Q92504 469 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 CENPNQ96H22 339 aaPredicted RBP10.76□□□□□ -0.69
DDB1-223ENST00000543658 ALPK1Q96QP1 1244 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 KLHDC3Q9BQ90 382 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 KLHL4Q9C0H6 718 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 ADAM19Q9H013 955 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 TSPAN10Q9H1Z9 355 aaPredicted RBP10.76□□□□□ -0.69
DDB1-223ENST00000543658 SEMA6AQ9H2E6 1030 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 SLC6A15Q9H2J7 730 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 ZDHHC11Q9H8X9 412 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 ACKR4Q9NPB9 350 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 C6orf203Q9P0P8 240 aaPredicted RBP10.76□□□□□ -0.69
DDB1-223ENST00000543658 KIF17Q9P2E2 1029 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 NPIPA1Q9UND3 350 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 MED31Q9Y3C7 131 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 LYVE1Q9Y5Y7 322 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 CACNA1GO43497 2377 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 ZNF407Q9C0G0 2248 aa10.76□□□□□ -0.69
DDB1-223ENST00000543658 TMEM72A0PK05 275 aa10.75□□□□□ -0.69
DDB1-223ENST00000543658 A8MVM7 634 aa10.75□□□□□ -0.69
DDB1-223ENST00000543658 H3BNX3 289 aa10.75□□□□□ -0.69
DDB1-223ENST00000543658 ETV2O00321 342 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms