RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 BEND4Q6ZU67 534 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ADGRG3Q86Y34 549 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TRIML2Q8N7C3 387 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PNPT1Q8TCS8 783 aaKnown RBP11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ZBTB18Q99592 522 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PSD2Q9BQI7 771 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 C12orf49Q9H741 205 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 MTHFD2LQ9H903 347 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 DLL4Q9NR61 685 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 EDARQ9UNE0 448 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 USH1CQ9Y6N9 552 aa11.66□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ZNF814B7Z6K7 855 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 RFXANKO14593 260 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 UBDO15205 165 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CYTIPO60759 359 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TFPTP0C1Z6 253 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ZCCHC18P0CG32 403 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PPP3CBP16298 524 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 HOXB9P17482 250 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PSMB1P20618 241 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 APOBEC1P41238 236 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 MAGEA8P43361 318 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 KEAP1Q14145 624 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 GTDC1Q4AE62 458 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TTMPQ5BVD1 217 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 C3orf33Q6P1S2 294 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 MSANTD1Q6ZTZ1 278 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 FUNDC1Q8IVP5 155 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SLC43A2Q8N370 569 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 IGFBPL1Q8WX77 278 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TMEM234Q8WY98 164 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PMM1Q92871 262 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PIK3IP1Q96FE7 263 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ZC3HAV1LQ96H79 300 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 C7orf26Q96N11 449 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 OR10A4Q9H209 315 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SLCO1B3Q9NPD5 702 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CTPS2Q9NRF8 586 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 GPR52Q9Y2T5 361 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 DSCAMO60469 2012 aa11.65□□□□□ -0.54
TNFRSF1A-215ENST00000543359 DSPPQ9NZW4 1301 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 AP3D1O14617 1153 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 KRT75O95678 551 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SLC7A1P30825 629 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 HOXC12P31275 282 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 RYKP34925 604 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 DIO1P49895 249 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 POLR2JP52435 117 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SYT14P1Q58G82 188 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TMEM201Q5SNT2 666 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 GRINAQ7Z429 371 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CMIPQ8IY22 773 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 GTF2H4Q92759 462 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 VPS33AQ96AX1 596 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 AURKBQ96GD4 344 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 REXO5Q96IC2 774 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ATP6V1G3Q96LB4 118 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 OR5B2Q96R09 309 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ACTR6Q9GZN1 396 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TPT1P8Q9HAU6 139 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SLC52A3Q9NQ40 469 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CHST2Q9Y4C5 530 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 NAV3Q8IVL0 2385 aa11.64□□□□□ -0.55
TNFRSF1A-215ENST00000543359 USF3Q68DE3 2245 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 IGKV3D-15A0A087WSY6 115 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 FAM234BA2RU67 622 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ZNF716A6NP11 495 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ZNF724A8MTY0 619 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 FAAHO00519 579 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 DIAPH2O60879 1101 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TGDSO95455 350 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ETFAP13804 333 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CD99P14209 185 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 NTF4P34130 210 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 OR3A2P47893 321 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 IDH2P48735 452 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 IDH3AP50213 366 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 HPCAP84074 193 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 H3F3AP84243 136 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 RASGEF1BQ0VAM2 473 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 FOXD4Q12950 439 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ACKR1Q16570 336 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SFRP5Q5T4F7 317 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SEZ6L2Q6UXD5 910 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 DNAJC14Q6Y2X3 702 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 MTDHQ86UE4 582 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 STK32CQ86UX6 486 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 MIER2Q8N344 545 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ARFGAP2Q8N6H7 521 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 WFDC11Q8NEX6 87 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SLC25A43Q8WUT9 341 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 SLC38A5Q8WUX1 472 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ZNF775Q96BV0 537 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ARL5BQ96KC2 179 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ZNF300Q96RE9 604 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 EBF4Q9BQW3 602 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TMEM204Q9BSN7 226 aa11.63□□□□□ -0.55
TNFRSF1A-215ENST00000543359 RSPO3Q9BXY4 272 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms