RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 TMEM200CA6NKL6 621 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 GTPBP1O00178 669 aaKnown RBP8.54□□□□□ -1.04
GNE-206ENST00000543356 PLD2O14939 933 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 OIP5O43482 229 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 COX6A1P12074 109 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 IFI30P13284 250 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 TGM1P22735 817 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 EVI2BP34910 448 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 GIPRP48546 466 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 EXT1Q16394 746 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 SLC25A30Q5SVS4 291 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 RPL13AP3Q6NVV1 102 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 SLC27A4Q6P1M0 643 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 MEX3DQ86XN8 651 aaKnown RBP8.54□□□□□ -1.04
GNE-206ENST00000543356 MISPQ8IVT2 679 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 CDK20Q8IZL9 346 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 ZNF540Q8NDQ6 660 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 OR8J1Q8NGP2 316 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 BRIX1Q8TDN6 353 aaKnown RBP8.54□□□□□ -1.04
GNE-206ENST00000543356 ELP5Q8TE02 316 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 C3orf49Q96BT1 292 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 ARSGQ96EG1 525 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 Q96MT0 163 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 SIGLEC11Q96RL6 698 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 PRRG3Q9BZD7 231 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 TBL1XR1Q9BZK7 514 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 SPRY4Q9C004 299 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 C12orf10Q9HB07 376 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 PLSCR2Q9NRY7 297 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 TBC1D23Q9NUY8 699 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 CLN6Q9NWW5 311 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 PSORS1C1Q9UIG5 152 aa8.54□□□□□ -1.04
GNE-206ENST00000543356 ASCC3Q8N3C0 2202 aaKnown RBP8.53□□□□□ -1.04
GNE-206ENST00000543356 A0A087WUJ7 227 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 LINC00854A0A1B0GVQ3 168 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 PTGES3LE9PB15 166 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 CDC42EP2O14613 210 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 RGS10O43665 173 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 ICMTO60725 284 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 IGF2P01344 180 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 MAKP20794 623 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 TTKP33981 857 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 PCYT1AP49585 367 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 ZNF117Q03924 483 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 ZBED5Q49AG3 693 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 CCDC58Q4VC31 144 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 XAF1Q6GPH4 301 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 DESI1Q6ICB0 168 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 PRSS48Q7RTY5 328 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 GPR141Q7Z602 305 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 SLC43A2Q8N370 569 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 IQCF1Q8N6M8 205 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 LILRB4Q8NHJ6 448 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 RNF138Q8WVD3 245 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 HGDQ93099 445 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 BPIFA2Q96DR5 249 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 MED30Q96HR3 178 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 SLC19A3Q9BZV2 496 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 MEPEQ9NQ76 525 aaPredicted RBP8.53□□□□□ -1.04
GNE-206ENST00000543356 C20orf141Q9NUB4 165 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 ERVK-18Q9QC07 812 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 PADI1Q9ULC6 663 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 ICAM5Q9UMF0 924 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 HS3ST3B1Q9Y662 390 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 MYO15AQ9UKN7 3530 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 PMS2P1A4D2B8 440 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 CLCA1A8K7I4 914 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 C9orf172C9J069 976 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 M0R129 80 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 ADAM10O14672 748 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 PNMTP11086 282 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 PCMT1P22061 227 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 CLDN6P56747 220 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 EFNB1P98172 346 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 TRIP6Q15654 476 aaKnown RBP8.53□□□□□ -1.04
GNE-206ENST00000543356 OCLNQ16625 522 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 HES3Q5TGS1 186 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 ACSM5Q6NUN0 579 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 CBLN3Q6UW01 205 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 ATG4DQ86TL0 474 aaPredicted RBP8.53□□□□□ -1.04
GNE-206ENST00000543356 SVOPQ8N4V2 548 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 SLC15A4Q8N697 577 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 M1APQ8TC57 530 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 FANK1Q8TC84 345 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 SLC22A8Q8TCC7 542 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 FGF11Q92914 225 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 MYDGFQ969H8 173 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 IMMP1LQ96LU5 166 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 TEX12Q9BXU0 123 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 DPH1Q9BZG8 443 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 RTN4RQ9BZR6 473 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 RYDENQ9NUL5 291 aaKnown RBP8.53□□□□□ -1.04
GNE-206ENST00000543356 CNOT2Q9NZN8 540 aaKnown RBP8.53□□□□□ -1.04
GNE-206ENST00000543356 VPS13AQ96RL7 3174 aa8.53□□□□□ -1.04
GNE-206ENST00000543356 A0A1W2PNU3 283 aaPredicted RBP8.52□□□□□ -1.05
GNE-206ENST00000543356 EFCAB9A8MZ26 197 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 KPNA4O00629 521 aaPredicted RBP8.52□□□□□ -1.05
GNE-206ENST00000543356 SOCS6O14544 535 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 DKK1O94907 266 aa8.52□□□□□ -1.05
GNE-206ENST00000543356 PIPP12273 146 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms