RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 OR52L1Q8NGH7 329 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 ABHD4Q8TB40 342 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 HAVCR2Q8TDQ0 301 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 JPH3Q8WXH2 748 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 RSC1A1Q92681 617 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC22A18Q96BI1 424 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 PGLYRP3Q96LB9 341 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 TEAD3Q99594 435 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF426Q9BUY5 554 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 C1QTNF7Q9BXJ2 289 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 PLA2G2FQ9BZM2 168 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 CLEC4MQ9H2X3 399 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 MED20Q9H944 212 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 ERVMER34-1Q9H9K5 563 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 CACYBPQ9HB71 228 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 ATP13A2Q9NQ11 1180 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 MEPEQ9NQ76 525 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 TRPV5Q9NQA5 729 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 POLE3Q9NRF9 147 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 ENAMQ9NRM1 1142 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 C20orf141Q9NUB4 165 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 TMEM74BQ9NUR3 256 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 FBXO34Q9NWN3 711 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 ING3Q9NXR8 418 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 PFDN2Q9UHV9 154 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 MSRAQ9UJ68 235 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 FBXL21Q9UKT6 434 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 BAIAP2Q9UQB8 552 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 POLR3KQ9Y2Y1 108 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 PRUNE2Q8WUY3 3088 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 ATG2AQ2TAZ0 1938 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 MYO7AQ13402 2215 aa4.8□□□□□ -1.64
ATPAF1-212ENST00000542495 TRAV1-2A0A0B4J238 106 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 A0A0B4J2E0 115 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 A0A1B0GX12 115 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 FAM86C2PA6NEL3 165 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 PRR23D1E9PI22 279 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 J3QW42 95 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 K7EQS6 105 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 CYR61O00622 381 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 PEX12O00623 359 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 OGG1O15527 345 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 TPD52L2O43399 206 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 B3GALT2O43825 422 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 BRINP1O60477 761 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 RFPL3O75679 317 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 SOX30O94993 753 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 GPR75O95800 540 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 CD1AP06126 327 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 GKN3PP0CG01 181 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 PRR23D2P0DMB1 279 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 BMP7P18075 431 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 AHCYP23526 432 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 TLX1P31314 330 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 RBM34P42696 430 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 TNFRSF4P43489 277 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 PITPNBP48739 271 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 ADPRHP54922 357 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 NRG3P56975 720 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 GNG2P59768 71 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 GPLD1P80108 840 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 E2F1Q01094 437 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 CSTF1Q05048 431 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 C19orf57Q0VDD7 668 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 MAB21L1Q13394 359 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 IKZF1Q13422 519 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 GPR68Q15743 365 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 RAB30Q15771 203 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 PRICKLE4Q2TBC4 344 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 AMZ1Q400G9 498 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC36A2Q495M3 483 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 DEFB134Q4QY38 66 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 CCNJQ5T5M9 372 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 IDNKQ5T6J7 187 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 BICRALQ6AI39 1079 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 PYHIN1Q6K0P9 492 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 SFXN4Q6P4A7 337 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 CREB3L2Q70SY1 520 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 GRAMD2AQ8IUY3 354 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 SULF2Q8IWU5 870 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 OR4N5Q8IXE1 308 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 GPR135Q8IZ08 494 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC44A3Q8N4M1 653 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 C19orf47Q8N9M1 422 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 OR7G1Q8NGA0 311 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 OR10H4Q8NGA5 316 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 OR13C2Q8NGS9 318 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 OR1E3Q8WZA6 343 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 TTC9Q92623 222 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 AKAP1Q92667 903 aaKnown RBP eCLIP4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 RFT1Q96AA3 541 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 CTHRC1Q96CG8 243 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 BPIFA2Q96DR5 249 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 SCMH1Q96GD3 660 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 LRFN5Q96NI6 719 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 ABHD1Q96SE0 405 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 GABRG3Q99928 467 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF559Q9BR84 538 aa4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 THAP7Q9BT49 309 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-212ENST00000542495 WACQ9BTA9 647 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms