RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 ZNF208O43345 1280 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 ADAM11O75078 769 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 TGM6O95932 706 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 TMIGD3P0DMS9 266 aaPredicted RBP12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 IGFBP2P18065 325 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 RYKP34925 604 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 PCGF2P35227 344 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 IDH2P48735 452 aaKnown RBP12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 GYS2P54840 703 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 TPD52P55327 224 aaPredicted RBP12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 MTPNP58546 118 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 RAC3P60763 192 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 MERTKQ12866 999 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 SF3A3Q12874 501 aaKnown RBP eCLIP12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 VEZF1Q14119 521 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 CYP51A1Q16850 503 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 TMEM176BQ3YBM2 270 aaPredicted RBP12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 RPS26P11Q5JNZ5 115 aaPredicted RBP12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 WBP2NLQ6ICG8 309 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 HACD2Q6Y1H2 254 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 CCDC80Q76M96 950 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 PATL1Q86TB9 770 aaKnown RBP12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 ADGRG3Q86Y34 549 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 LIX1LQ8IVB5 337 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 CLIP4Q8N3C7 705 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 NAXEQ8NCW5 288 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 ZNF563Q8TA94 476 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 HOPXQ9BPY8 73 aaPredicted RBP12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 ECSITQ9BQ95 431 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 ARMCX1Q9P291 453 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 CHRNA9Q9UGM1 479 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 TRAPPC4Q9Y296 219 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 ARL2BPQ9Y2Y0 163 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 CHST2Q9Y4C5 530 aa12.36□□□□□ -0.43
TNFSF13B-206ENST00000542136 NDUFAB1O14561 156 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 DNPH1O43598 174 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 MFN2O95140 757 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 SYNGR4O95473 234 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 IL11P20809 199 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 EIF1AXP47813 144 aaKnown RBP12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 ASCL1P50553 236 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 RNF144AP50876 292 aaPredicted RBP12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 POLR2HP52434 150 aaKnown RBP12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 COPZ1P61923 177 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 PON3Q15166 354 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 GUSBP1Q15486 140 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 VMACQ2NL98 169 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 ERICH5Q6P6B1 374 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 SLC43A2Q8N370 569 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 LSMEM1Q8N8F7 131 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 OR10A6Q8NH74 314 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 FNDC9Q8TBE3 224 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 RASSF5Q8WWW0 418 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 SMPDL3BQ92485 455 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 REXO5Q96IC2 774 aaKnown RBP12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 GMPPAQ96IJ6 420 aaPredicted RBP12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 GPATCH1Q9BRR8 931 aaKnown RBP12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 HDGFL3Q9Y3E1 203 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 DOCK7Q96N67 2140 aa12.35□□□□□ -0.43
TNFSF13B-206ENST00000542136 A0A1W2PNV4 684 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 TNFSF11O14788 317 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 MSTNO14793 375 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 HNRNPRO43390 633 aaKnown RBP12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 CXCL13O43927 109 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 GCM2O75603 506 aaPredicted RBP12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 TNFSF13O75888 250 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 DCTN3O75935 186 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 BMP5P22003 454 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 SLC7A1P30825 629 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 SFTPDP35247 375 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 CSNK2A1P68400 391 aaPredicted RBP12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 SELPLGQ14242 412 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 CAPRIN1Q14444 709 aaKnown RBP12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 RNPS1Q15287 305 aaKnown RBP12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 SYT14P1Q58G82 188 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 RABL3Q5HYI8 236 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 FAM91A1Q658Y4 838 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 TMPPEQ6ZT21 453 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 P4HA3Q7Z4N8 544 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 HMGN2P46Q86SG4 172 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 ARMC8Q8IUR7 673 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 ZZZ3Q8IYH5 903 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 FIG4Q92562 907 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 INTS12Q96CB8 462 aaKnown RBP12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 ZNF845Q96IR2 970 aaPredicted RBP12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 ZNF583Q96ND8 569 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 TACO1Q9BSH4 297 aaKnown RBP12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 UCK2Q9BZX2 261 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 FAM107BQ9H098 131 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 C12orf10Q9HB07 376 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 CTPS2Q9NRF8 586 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 KLHL28Q9NXS3 571 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 OSGIN1Q9UJX0 560 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 PACSIN3Q9UKS6 424 aa12.34□□□□□ -0.43
TNFSF13B-206ENST00000542136 M0QX08 132 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 AP3D1O14617 1153 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 FMO6PO60774 539 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 SHOX2O60902 331 aaPredicted RBP12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 AQP8O94778 261 aa12.33□□□□□ -0.44
TNFSF13B-206ENST00000542136 PMS2P2O95744 297 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms