RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SELENOWP63302 87 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 SLC25A3Q00325 362 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 HSPB2Q16082 182 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 SGCBQ16585 318 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 FXNQ16595 210 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 DUSP7Q16829 419 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 RIPPLY2Q5TAB7 128 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 GTF2IRD2BQ6EKJ0 949 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 OR2A2Q6IF42 318 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 C5orf46Q6UWT4 87 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 GTF2IRD2Q86UP8 949 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 RBM15BQ8NDT2 890 aaKnown RBP16.91■□□□□ 0.3
VPS33A-205ENST00000541169 OR52E4Q8NGH9 312 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 OR5M1Q8NGP8 315 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 SSC4DQ8WTU2 575 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 ASB5Q8WWX0 329 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 DDIT4LQ96D03 193 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 MUC13Q9H3R2 512 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 TMEM27Q9HBJ8 222 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 MAGEL2Q9UJ55 1249 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 MCTS1Q9ULC4 181 aaKnown RBP16.91■□□□□ 0.3
VPS33A-205ENST00000541169 HDGFL3Q9Y3E1 203 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 FAM215AQ9Y5M1 114 aa16.91■□□□□ 0.3
VPS33A-205ENST00000541169 PHF3Q92576 2039 aaKnown RBP16.91■□□□□ 0.3
VPS33A-205ENST00000541169 MBD3L4A6NDZ8 208 aaPredicted RBP16.9■□□□□ 0.3
VPS33A-205ENST00000541169 MBD3L3A6NE82 208 aaPredicted RBP16.9■□□□□ 0.3
VPS33A-205ENST00000541169 MBD3L5A6NJ08 208 aaPredicted RBP16.9■□□□□ 0.3
VPS33A-205ENST00000541169 AP3D1O14617 1153 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 DNPH1O43598 174 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 TPST1O60507 370 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 GKN3PP0CG01 181 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 T-ENOLP0DO92 83 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 GGT1P19440 569 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 CXCR1P25024 350 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 TACR3P29371 465 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 CPOXP36551 454 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 CARD18P57730 90 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 CSNK2A1P68400 391 aaPredicted RBP16.9■□□□□ 0.3
VPS33A-205ENST00000541169 BNIP2Q12982 314 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 NRF1Q16656 503 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 DNAL1Q4LDG9 190 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 HBMQ6B0K9 141 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 ZNF613Q6PF04 617 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 ULK3Q6PHR2 472 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 GGNQ86UU5 652 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 UBQLNLQ8IYU4 475 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 ZNF808Q8N4W9 903 aaPredicted RBP16.9■□□□□ 0.3
VPS33A-205ENST00000541169 SMYD1Q8NB12 490 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 OR2V1Q8NHB1 315 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 MBD3L2Q8NHZ7 208 aaPredicted RBP16.9■□□□□ 0.3
VPS33A-205ENST00000541169 FIG4Q92562 907 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 CPNE4Q96A23 557 aaPredicted RBP16.9■□□□□ 0.3
VPS33A-205ENST00000541169 CCDC120Q96HB5 630 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 ARHGDIGQ99819 225 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 TUBA1CQ9BQE3 449 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 GORASP2Q9H8Y8 452 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 CD300AQ9UGN4 299 aa16.9■□□□□ 0.3
VPS33A-205ENST00000541169 SPENQ96T58 3664 aaKnown RBP16.9■□□□□ 0.3
VPS33A-205ENST00000541169 TMED7-TICAM2A0A0A6YYA0 188 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 CLCA1A8K7I4 914 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 PYCARD-AS1I3L0S3 204 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 EIF1AYO14602 144 aaKnown RBP16.89■□□□□ 0.29
VPS33A-205ENST00000541169 SEC14L5O43304 696 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 ADAM11O75078 769 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 SEMA7AO75326 666 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 LDLRP01130 860 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 OPN1SWP03999 348 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 CRHP06850 196 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 GLI4P10075 376 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 CD247P20963 164 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 IFNA8P32881 189 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 ZNF136P52737 540 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 CLDN15P56746 228 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 CLDN20P56880 219 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 PMPCAQ10713 525 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 TMEM176BQ3YBM2 270 aaPredicted RBP16.89■□□□□ 0.29
VPS33A-205ENST00000541169 LRRC23Q53EV4 343 aaPredicted RBP16.89■□□□□ 0.29
VPS33A-205ENST00000541169 CYBRD1Q53TN4 286 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 SYT14P1Q58G82 188 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 RTL6Q6ICC9 239 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 C6orf89Q6UWU4 347 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 ADGRG3Q86Y34 549 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 CADM2Q8N3J6 435 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 SMPDL3BQ92485 455 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 TRIB1Q96RU8 372 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 KLHDC3Q9BQ90 382 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 PCDHAC1Q9H158 963 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 CTPS2Q9NRF8 586 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 GLRX2Q9NS18 164 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 OSGIN1Q9UJX0 560 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 SAMD4AQ9UPU9 718 aaKnown RBP16.89■□□□□ 0.29
VPS33A-205ENST00000541169 TRAPPC4Q9Y296 219 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 TMED7Q9Y3B3 224 aa16.89■□□□□ 0.29
VPS33A-205ENST00000541169 HELZ2Q9BYK8 2649 aaKnown RBP16.89■□□□□ 0.29
VPS33A-205ENST00000541169 HIVEP3Q5T1R4 2406 aa16.88■□□□□ 0.29
VPS33A-205ENST00000541169 SLC22A20A6NK97 555 aa16.88■□□□□ 0.29
VPS33A-205ENST00000541169 SHISA8B8ZZ34 492 aa16.88■□□□□ 0.29
VPS33A-205ENST00000541169 ZNHIT1O43257 154 aa16.88■□□□□ 0.29
VPS33A-205ENST00000541169 SYNGR4O95473 234 aa16.88■□□□□ 0.29
VPS33A-205ENST00000541169 RAC3P60763 192 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms