RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 A0A1W2PNR3 127 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 GMNCA6NCL1 334 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 BBIP1A8MTZ0 92 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 MRASO14807 208 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 TNFSF13O75888 250 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 SMNDC1O75940 238 aaKnown RBP eCLIP8.27□□□□□ -1.094e-71■■■■■ 31.7
SNHG1-215ENST00000540904 PLGP00747 810 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-215ENST00000540904 PABPC4LP0CB38 370 aaKnown RBP8.27□□□□□ -1.09
SNHG1-215ENST00000540904 TFPIP10646 304 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 PRG2P13727 222 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 UQCRBP14927 111 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 ETS2P15036 469 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 CCNA2P20248 432 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 ADSLP30566 484 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-215ENST00000540904 APOBEC1P41238 236 aaKnown RBP8.27□□□□□ -1.09
SNHG1-215ENST00000540904 GNGT1P63211 74 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 EPS8Q12929 822 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 SNTB1Q13884 538 aaKnown RBP8.27□□□□□ -1.09
SNHG1-215ENST00000540904 ZNF239Q16600 458 aaKnown RBP8.27□□□□□ -1.09
SNHG1-215ENST00000540904 RABL3Q5HYI8 236 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 CPLX4Q7Z7G2 160 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 PTOV1Q86YD1 416 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 POU5F2Q8N7G0 328 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 C11orf65Q8NCR3 313 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 HIPK4Q8NE63 616 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 OR10A6Q8NH74 314 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 ROBO4Q8WZ75 1007 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 RNASE6Q93091 150 aaKnown RBP8.27□□□□□ -1.09
SNHG1-215ENST00000540904 LRRC58Q96CX6 371 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 DNAJA3Q96EY1 480 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 LRRC46Q96FV0 321 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 REXO5Q96IC2 774 aaKnown RBP8.27□□□□□ -1.09
SNHG1-215ENST00000540904 SPOCK3Q9BQ16 436 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 SPATA9Q9BWV2 254 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 SRXN1Q9BYN0 137 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 NSRP1Q9H0G5 558 aaKnown RBP8.27□□□□□ -1.09
SNHG1-215ENST00000540904 ENKD1Q9H0I2 346 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 PIF1Q9H611 641 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 KAT8Q9H7Z6 458 aaKnown RBP8.27□□□□□ -1.09
SNHG1-215ENST00000540904 CHRNA9Q9UGM1 479 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 PACSIN3Q9UKS6 424 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 CLEC4AQ9UMR7 237 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 ANGPT4Q9Y264 503 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 CHST2Q9Y4C5 530 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 KIAA1549Q9HCM3 1950 aa8.27□□□□□ -1.09
SNHG1-215ENST00000540904 PHF3Q92576 2039 aaKnown RBP8.27□□□□□ -1.09
SNHG1-215ENST00000540904 PCNX3Q9H6A9 2034 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 SETXQ7Z333 2677 aaKnown RBP8.26□□□□□ -1.09
SNHG1-215ENST00000540904 SYT5O00445 386 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 FAAHO00519 579 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 SLC22A2O15244 555 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 FRS3O43559 492 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 CRHP06850 196 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 PRF1P14222 555 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 IGFBP2P18065 325 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 DRD4P21917 467 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 TACR3P29371 465 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 ACAA2P42765 397 aaKnown RBP8.26□□□□□ -1.09
SNHG1-215ENST00000540904 SLC1A3P43003 542 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 KIR2DL2P43627 348 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-215ENST00000540904 HTR3AP46098 478 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 CPA2P48052 419 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 POLR2HP52434 150 aaKnown RBP8.26□□□□□ -1.09
SNHG1-215ENST00000540904 DLX5P56178 289 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 CTBP2P56545 445 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 COPZ1P61923 177 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 HOXC5Q00444 222 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 ZSWIM7Q19AV6 140 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 SYT14P1Q58G82 188 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 COQ5Q5HYK3 327 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 EEF1A1P5Q5VTE0 462 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 NANOGP8Q6NSW7 305 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 VWA1Q6PCB0 445 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 ZNF550Q7Z398 422 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 BTLAQ7Z6A9 289 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 SERPINA11Q86U17 422 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 MTDHQ86UE4 582 aaKnown RBP8.26□□□□□ -1.09
SNHG1-215ENST00000540904 LSRQ86X29 649 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-215ENST00000540904 ADGRG3Q86Y34 549 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 MCEMP1Q8IX19 187 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 DMRTC2Q8IXT2 367 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-215ENST00000540904 CADM2Q8N3J6 435 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 PCYOX1LQ8NBM8 494 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 ACBD4Q8NC06 268 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 SLC25A43Q8WUT9 341 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-215ENST00000540904 CPNE4Q96A23 557 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-215ENST00000540904 STARD4Q96DR4 205 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 ZNF607Q96SK3 696 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 SH3GL1Q99961 368 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 SPATA5L1Q9BVQ7 753 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 RBM24Q9BX46 236 aaKnown RBP8.26□□□□□ -1.09
SNHG1-215ENST00000540904 OR11A1Q9GZK7 315 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 PIGMQ9H3S5 423 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 COQ10BQ9H8M1 238 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 NANOGQ9H9S0 305 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 GID8Q9NWU2 228 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 JKAMPQ9P055 326 aa8.26□□□□□ -1.09
SNHG1-215ENST00000540904 SPIN1Q9Y657 262 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-215ENST00000540904 TMED7-TICAM2A0A0A6YYA0 188 aa8.25□□□□□ -1.09
SNHG1-215ENST00000540904 IGHV3-15A0A0B4J1V0 119 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms